RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 LUMP51884 338 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 CRIP2P52943 208 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 CLDN12P56749 244 aa13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 PLGLAQ15195 96 aa13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 GLDNQ6ZMI3 551 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 GNB4Q9HAV0 340 aa13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 RAB22AQ9UL26 194 aa13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 LDLRAD4O15165 306 aa13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 CX3CL1P78423 397 aa13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 MRPS15P82914 257 aaKnown RBP13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 ZNF616Q08AN1 781 aa13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 TMEM267Q0VDI3 215 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 TBCEQ15813 527 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 TCTEX1D1Q8N7M0 179 aa13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 ZNF221Q9UK13 617 aa13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 BLOC1S6Q9UL45 172 aa13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 RNF150Q9ULK6 438 aa13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 NUBP2Q9Y5Y2 271 aa13.68□□□□□ -0.22
PDLIM2-208ENST00000416159 TMEM272A0A1B0GTI8 110 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 A0A1W2PN81 502 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 ERICH4A6NGS2 130 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 TRDCB7Z8K6 153 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 PDCD5O14737 125 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 CHRNA7P36544 502 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 INSL3P51460 131 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 NDPQ00604 133 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 ECSCRQ19T08 205 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 ZNF260Q3ZCT1 412 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 C19orf54Q5BKX5 351 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 PLAC9Q5JTB6 97 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 HES5Q5TA89 166 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 C11orf87Q6NUJ2 197 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 ZNF367Q7RTV3 350 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 SCOCQ9UIL1 159 aa13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 FOXA2Q9Y261 457 aaPredicted RBP13.67□□□□□ -0.22
PDLIM2-208ENST00000416159 TRAV1-2A0A0B4J238 106 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 FCN1O00602 326 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 PROP1O75360 226 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 CD3GP09693 182 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 ECI1P42126 302 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 SERPINB10P48595 397 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 CD200R1LQ6Q8B3 271 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 IZUMO2Q6UXV1 221 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 OR4A4PQ8NGN8 299 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 ABHD5Q8WTS1 349 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 CNBD2Q96M20 576 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 OR5B12Q96R08 314 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 TSNAXQ99598 290 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 TOLLIPQ9H0E2 274 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 RDH8Q9NYR8 311 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 METTL1Q9UBP6 276 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 FBXO7Q9Y3I1 522 aa13.66□□□□□ -0.22
PDLIM2-208ENST00000416159 IGKV1-6A0A0C4DH72 117 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 SPDEFO95238 335 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 APOA2P02652 100 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 TFAP2AP05549 437 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 EGR2P11161 476 aaPredicted RBP13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 RPS16P62249 146 aaKnown RBP13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 GNB1P62873 340 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 PSG5Q15238 335 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 SSX1Q16384 188 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 ASPHD1Q5U4P2 390 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 PYHIN1Q6K0P9 492 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 ZNF562Q6V9R5 426 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 PPP1R27Q86WC6 154 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 PDPNQ86YL7 162 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 DRAXINQ8NBI3 349 aaPredicted RBP13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 RAB3CQ96E17 227 aa13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 LSM4Q9Y4Z0 139 aaKnown RBP13.65□□□□□ -0.22
PDLIM2-208ENST00000416159 SORL1Q92673 2214 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 FABP7O15540 132 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 SOX15O60248 233 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 GADD45AP24522 165 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 MYL9P24844 172 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 AKIRIN2Q53H80 203 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 UNQ5815/PRO19632Q6UWF5 114 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 ZNF383Q8NA42 475 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 DCUN1D4Q92564 292 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 PRR25Q96S07 402 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 CLCC1Q96S66 551 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 GAB2Q9UQC2 676 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 KCNK7Q9Y2U2 307 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 A3GALT2U3KPV4 340 aa13.64□□□□□ -0.23
PDLIM2-208ENST00000416159 TRDV1A0A1B0GX56 115 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 IFITM5A6NNB3 132 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 OVOL1O14753 267 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 NHLRC4P0CG21 123 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 RAB6AP20340 208 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 CD40LGP29965 261 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 PLA2G7Q13093 441 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 ACTBL2Q562R1 376 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 ZNF429Q86V71 674 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 OR10R2Q8NGX6 335 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 FLYWCH2Q96CP2 140 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 NDUFB11Q9NX14 153 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 RAB26Q9ULW5 256 aa13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 ZNF256Q9Y2P7 627 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-208ENST00000416159 LINC01619G3V211 115 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 M0R1X1 148 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms