RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 THRSPQ92748 146 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 RFT1Q96AA3 541 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 TPD52L3Q96J77 140 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 PPP1R36Q96LQ0 422 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 PRRG3Q9BZD7 231 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 CSTL1Q9H114 145 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 NKIRAS1Q9NYS0 192 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 U3KQE9 123 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 TMEM212A6NML5 194 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 OR3A3P47888 321 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 KHDC1LQ5JSQ8 128 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 OR2T5Q6IEZ7 315 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 SERPINA12Q8IW75 414 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 C6orf223Q8N319 242 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF485Q8NCK3 441 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 OR2T29Q8NH02 315 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 TEX47Q8TBZ9 253 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 NXF2Q9GZY0 626 aaKnown RBP4.35□□□□□ -1.71
LMBR1-204ENST00000415428 Q9H3A6 140 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 EFCAB1Q9HAE3 211 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 ARMC1Q9NVT9 282 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 A0A1W2PN81 502 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 SHOXO15266 292 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 OGG1O15527 345 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 SPINT2O43291 252 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 HLA-DQA2P01906 255 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 CTRB1P17538 263 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 SRMP19623 302 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 ATP6V1B2P21281 511 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 GABRR1P24046 479 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 CHRNA7P36544 502 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 TPPP2P59282 170 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 EXOSC2Q13868 293 aaKnown RBP4.35□□□□□ -1.71
LMBR1-204ENST00000415428 KISS1Q15726 138 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 LRRC36Q1X8D7 754 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 LRRC23Q53EV4 343 aaPredicted RBP4.35□□□□□ -1.71
LMBR1-204ENST00000415428 CTRB2Q6GPI1 263 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 MOB3BQ86TA1 216 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 GIMAP1Q8WWP7 306 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 FRRS1LQ9P0K9 344 aa4.35□□□□□ -1.71
LMBR1-204ENST00000415428 AQP12BA6NM10 295 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 F8W735 103 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-204ENST00000415428 TNFRSF11BO00300 401 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 TRGV3P03979 118 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 COX4I1P13073 169 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 PTBP1P26599 531 aaKnown RBP eCLIP4.34□□□□□ -1.716e-7■■■■■ 27.2
LMBR1-204ENST00000415428 SSTR5P35346 364 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 C12orf74Q32Q52 190 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 LPCAT4Q643R3 524 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 AQP12AQ8IXF9 295 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 TMEM61Q8N0U2 210 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 TMEM167AQ8TBQ9 72 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 PHYHIPQ92561 330 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 KCTD14Q9BQ13 255 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-204ENST00000415428 RNF167Q9H6Y7 350 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 CXorf65A6NEN9 183 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 SYT7O43581 403 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 CA2P00918 260 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 HBZP02008 142 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 UBBP0CG47 229 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 H2AFXP16104 143 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-204ENST00000415428 GABRB1P18505 474 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 P2RY14Q15391 338 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 AQP11Q8NBQ7 271 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 CXorf58Q96LI9 332 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 H2AFY2Q9P0M6 372 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-204ENST00000415428 OR14J1Q9UGF5 321 aa4.34□□□□□ -1.71
LMBR1-204ENST00000415428 SRRM4A7MD48 611 aaKnown RBP4.34□□□□□ -1.72
LMBR1-204ENST00000415428 RBFOX2O43251 390 aaKnown RBP eCLIP4.34□□□□□ -1.723e-6■■■□□ 19.2
LMBR1-204ENST00000415428 TUSC2O75896 110 aa4.34□□□□□ -1.72
LMBR1-204ENST00000415428 CSTBP04080 98 aaKnown RBP4.34□□□□□ -1.72
LMBR1-204ENST00000415428 CD40LGP29965 261 aa4.34□□□□□ -1.72
LMBR1-204ENST00000415428 PSME3P61289 254 aa4.34□□□□□ -1.72
LMBR1-204ENST00000415428 TPBGQ13641 420 aa4.34□□□□□ -1.72
LMBR1-204ENST00000415428 MMDQ15546 238 aa4.34□□□□□ -1.72
LMBR1-204ENST00000415428 C1orf100Q5SVJ3 147 aa4.34□□□□□ -1.72
LMBR1-204ENST00000415428 SIGIRRQ6IA17 410 aa4.34□□□□□ -1.72
LMBR1-204ENST00000415428 PARP11Q9NR21 331 aa4.34□□□□□ -1.72
LMBR1-204ENST00000415428 ELOA3CA0A087WX78 387 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-204ENST00000415428 NBDYA0A0U1RRE5 68 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 OR4C46A6NHA9 309 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 H0YJX3 145 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 SLC16A6O15403 523 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 TSPOP30536 169 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 RPS27P42677 84 aaKnown RBP4.33□□□□□ -1.72
LMBR1-204ENST00000415428 IFFO1Q0D2I5 559 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 ASRGL1Q7L266 308 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 BCAS4Q8TDM0 211 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 MCUR1Q96AQ8 359 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 C6orf62Q9GZU0 229 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-204ENST00000415428 AKIP1Q9NQ31 210 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 FAM118AQ9NWS6 357 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 BOLA1Q9Y3E2 137 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 SIRPB1O00241 398 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 CCDC22O60826 627 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 FGF9P31371 208 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-204ENST00000415428 SYNJ2BPP57105 145 aa4.33□□□□□ -1.72
LMBR1-204ENST00000415428 PAN3Q58A45 887 aaKnown RBP4.33□□□□□ -1.72
LMBR1-204ENST00000415428 LCE2DQ5TA82 110 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-204ENST00000415428 OTPQ5XKR4 325 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms