RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 C17orf98A8MV24 154 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 B4DEV8 164 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 PTBP3O95758 552 aaKnown RBP13.29□□□□□ -0.28
HOXD3-202ENST00000410016 CLDN1O95832 211 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 CCL11P51671 97 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 ZNF816Q0VGE8 651 aaPredicted RBP13.29□□□□□ -0.28
HOXD3-202ENST00000410016 PMS2P11Q13670 270 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 TRIP6Q15654 476 aaKnown RBP13.29□□□□□ -0.28
HOXD3-202ENST00000410016 OR2B11Q5JQS5 317 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 PRAMEF6Q5VXH4 476 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 ZNF808Q8N4W9 903 aaPredicted RBP13.29□□□□□ -0.28
HOXD3-202ENST00000410016 C9orf106Q8NAJ2 232 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 MRGPRDQ8TDS7 321 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 METRNQ9UJH8 293 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 DIDO1Q9BTC0 2240 aaKnown RBP13.29□□□□□ -0.28
HOXD3-202ENST00000410016 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.29□□□□□ -0.28
HOXD3-202ENST00000410016 UBE2L5PA0A1B0GUS4 154 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 CLN5O75503 358 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 S1PR2O95136 353 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 KITLGP21583 273 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 PLA2G5P39877 138 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 OR8G2PQ6IF36 304 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 MRGPRGQ86SM5 289 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 P2RX4Q99571 388 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 NBEAQ8NFP9 2946 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 TGIF2-C20orf24A0A0A6YYL0 155 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 S100A9P06702 114 aaKnown RBP13.28□□□□□ -0.28
HOXD3-202ENST00000410016 CECR9P0C854 216 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 MSMO1Q15800 293 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 C1orf162Q8NEQ5 155 aaPredicted RBP13.28□□□□□ -0.28
HOXD3-202ENST00000410016 TCEAL7Q9BRU2 100 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 MSL2Q9HCI7 577 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.28□□□□□ -0.28
HOXD3-202ENST00000410016 FZR1Q9UM11 496 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 TIMM9Q9Y5J7 89 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 EIF2S3P41091 472 aaKnown RBP13.28□□□□□ -0.28
HOXD3-202ENST00000410016 GABRA2P47869 451 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 ELLP55199 621 aaPredicted RBP13.28□□□□□ -0.28
HOXD3-202ENST00000410016 LINC00205P59089 165 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 FOXF2Q12947 444 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 KIAA0141Q14154 515 aaPredicted RBP13.28□□□□□ -0.28
HOXD3-202ENST00000410016 IGFL2Q6UWQ7 119 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 BEND4Q6ZU67 534 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 TPRX1Q8N7U7 411 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 TCTEX1D2Q8WW35 142 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 SPOCK3Q9BQ16 436 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 ZNF251Q9BRH9 671 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 AGMATQ9BSE5 352 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 UFSP2Q9NUQ7 469 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 TMEM242Q9NWH2 141 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 CLN8Q9UBY8 286 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 VAX2Q9UIW0 290 aa13.28□□□□□ -0.28
HOXD3-202ENST00000410016 MAP1LC3B2A6NCE7 125 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 IFNL4K9M1U5 179 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 AQP7O14520 342 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 HOXA5P20719 270 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 SSTR5P35346 364 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 FABP6P51161 128 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 PNRC1Q12796 327 aaPredicted RBP13.27□□□□□ -0.29
HOXD3-202ENST00000410016 NCMAPQ5T1S8 102 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 BTNL3Q6UXE8 466 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 OR13A1Q8NGR1 328 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 LURAP1Q96LR2 239 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 MAP1LC3BQ9GZQ8 125 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 SDF2L1Q9HCN8 221 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 LINC00473A8K010 186 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 LINC00587B1AMM8 73 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 CLDN14O95500 239 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 IGLV1-44P01699 117 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 COL10A1Q03692 680 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 CATR1Q13166 79 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 ACSM6Q6P461 480 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 NINJ1Q92982 152 aa13.27□□□□□ -0.29
HOXD3-202ENST00000410016 MRPL37Q9BZE1 423 aaKnown RBP13.27□□□□□ -0.29
HOXD3-202ENST00000410016 A0A1B0GWJ7 208 aa13.26□□□□□ -0.29
HOXD3-202ENST00000410016 OR5H1A6NKK0 313 aa13.26□□□□□ -0.29
HOXD3-202ENST00000410016 IFITM10A6NMD0 228 aa13.26□□□□□ -0.29
HOXD3-202ENST00000410016 ZNF891A8MT65 544 aaPredicted RBP13.26□□□□□ -0.29
HOXD3-202ENST00000410016 TIMM8AO60220 97 aaPredicted RBP13.26□□□□□ -0.29
HOXD3-202ENST00000410016 ZG16O60844 167 aa13.26□□□□□ -0.29
HOXD3-202ENST00000410016 TUBG1P23258 451 aa13.26□□□□□ -0.29
HOXD3-202ENST00000410016 CD82P27701 267 aa13.26□□□□□ -0.29
HOXD3-202ENST00000410016 WDR25Q64LD2 544 aaPredicted RBP13.26□□□□□ -0.29
HOXD3-202ENST00000410016 TUBG2Q9NRH3 451 aa13.26□□□□□ -0.29
HOXD3-202ENST00000410016 PLSCR4Q9NRQ2 329 aa13.26□□□□□ -0.29
HOXD3-202ENST00000410016 SFTPCP11686 197 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 WT1P19544 449 aaPredicted RBP13.25□□□□□ -0.29
HOXD3-202ENST00000410016 HOXC12P31275 282 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 RND2P52198 227 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 CD81P60033 236 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 ATP6V1FQ16864 119 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 TCTEX1D1Q8N7M0 179 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 RFESDQ8TAC1 157 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 ZDHHC16Q969W1 377 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 NIT2Q9NQR4 276 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 GSN-AS1Q9NRJ2 163 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 SLC39A9Q9NUM3 307 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 CACNA1GO43497 2377 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 TRAV20A0A0B4J274 112 aa13.25□□□□□ -0.29
HOXD3-202ENST00000410016 CEBPZOSA8MTT3 80 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms