RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 TSPAN15O95858 294 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 KRASP01116 189 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 PRH1P02810 166 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 G6PCP35575 357 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 EDDM3BP56851 147 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 LOXL3P58215 753 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 BSPH1Q075Z2 132 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 ADIPOQQ15848 244 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 Q3ZCU0 254 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 STUMQ69YW2 141 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 SSX8Q7RTT4 187 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 OR2G3Q8NGZ4 309 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 C14orf79Q96F83 325 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 SEC11CQ9BY50 192 aa16.72■□□□□ 0.27
USP39-204ENST00000409766 NKX6-2Q9C056 277 aaPredicted RBP16.72■□□□□ 0.27
USP39-204ENST00000409766 DYSFO75923 2080 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 ADGRG4Q8IZF6 3080 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 YPEL1O60688 119 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 CYB5R3P00387 301 aaPredicted RBP16.71■□□□□ 0.27
USP39-204ENST00000409766 CGB3P0DN86 165 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 CGB7P0DN87 165 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 IAPPP10997 89 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 SELLP14151 372 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 TMPRSS3P57727 454 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 TAS2R30P59541 319 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 TMEM267Q0VDI3 215 aaPredicted RBP16.71■□□□□ 0.27
USP39-204ENST00000409766 GUCA2BQ16661 112 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 SVBPQ8N300 66 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 FAM216AQ8WUB2 273 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 YPEL2Q96QA6 119 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 KCNJ16Q9NPI9 418 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 PSENENQ9NZ42 101 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 OR6C3Q9NZP0 311 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 GNG12Q9UBI6 72 aa16.71■□□□□ 0.27
USP39-204ENST00000409766 PROP1O75360 226 aa16.7■□□□□ 0.26
USP39-204ENST00000409766 SNCAP37840 140 aa16.7■□□□□ 0.26
USP39-204ENST00000409766 DVL1P1P54792 670 aaPredicted RBP16.7■□□□□ 0.26
USP39-204ENST00000409766 LINC00205P59089 165 aa16.7■□□□□ 0.26
USP39-204ENST00000409766 RBPJQ06330 500 aa16.7■□□□□ 0.26
USP39-204ENST00000409766 PUSL1Q8N0Z8 303 aaKnown RBP16.7■□□□□ 0.26
USP39-204ENST00000409766 COMMD1Q8N668 190 aa16.7■□□□□ 0.26
USP39-204ENST00000409766 GNPNAT1Q96EK6 184 aaPredicted RBP16.7■□□□□ 0.26
USP39-204ENST00000409766 RAI1Q7Z5J4 1906 aaPredicted RBP16.7■□□□□ 0.26
USP39-204ENST00000409766 UMAD1C9J7I0 102 aa16.7■□□□□ 0.26
USP39-204ENST00000409766 FAM157AC9JC47 383 aa16.7■□□□□ 0.26
USP39-204ENST00000409766 DFFBO76075 338 aa16.7■□□□□ 0.26
USP39-204ENST00000409766 ZNF273Q14593 569 aa16.7■□□□□ 0.26
USP39-204ENST00000409766 C9JQL5 133 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 CLDN14O95500 239 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 OR4A8P0C604 315 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 UBE2KP61086 200 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 TNFRSF9Q07011 255 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 DUX4L9Q6RFH8 374 aaPredicted RBP16.69■□□□□ 0.26
USP39-204ENST00000409766 TGIF2LYQ8IUE0 185 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 RND1Q92730 232 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 PLPPR2Q96GM1 343 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 SCRT1Q9BWW7 348 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 CALYQ9NYX4 217 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 HSPB7Q9UBY9 170 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 TANC2Q9HCD6 1990 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 SPTBN4Q9H254 2564 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 SMG1Q96Q15 3661 aaKnown RBP16.69■□□□□ 0.26
USP39-204ENST00000409766 DNASE2O00115 360 aaPredicted RBP16.69■□□□□ 0.26
USP39-204ENST00000409766 GPR12P47775 334 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 FAM213BQ8TBF2 198 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 GAFA1Q96PS6 74 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 LAMP3Q9UQV4 416 aa16.69■□□□□ 0.26
USP39-204ENST00000409766 LRRC30A6NM36 301 aa16.68■□□□□ 0.26
USP39-204ENST00000409766 NUPL2O15504 423 aaKnown RBP16.68■□□□□ 0.26
USP39-204ENST00000409766 DUTP33316 252 aaKnown RBP16.68■□□□□ 0.26
USP39-204ENST00000409766 ZNF134P52741 427 aa16.68■□□□□ 0.26
USP39-204ENST00000409766 RUNX1Q01196 453 aa16.68■□□□□ 0.26
USP39-204ENST00000409766 C17orf58Q2M2W7 97 aa16.68■□□□□ 0.26
USP39-204ENST00000409766 DEFB108BQ8NET1 73 aa16.68■□□□□ 0.26
USP39-204ENST00000409766 DIRC2Q96SL1 478 aa16.68■□□□□ 0.26
USP39-204ENST00000409766 VKORC1Q9BQB6 163 aa16.68■□□□□ 0.26
USP39-204ENST00000409766 MED19A0JLT2 244 aaPredicted RBP16.67■□□□□ 0.26
USP39-204ENST00000409766 C17orf100A8MU93 164 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 CD55P08174 381 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 SFTA3P0C7M3 94 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 METTL15P1P0C7V9 234 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 CCL8P80075 99 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 ARL16Q0P5N6 197 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 TEX36Q5VZQ5 186 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 NCR3LG1Q68D85 454 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 ZNF788Q6ZQV5 615 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 WFIKKN1Q96NZ8 548 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 RBKSQ9H477 322 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.67■□□□□ 0.26
USP39-204ENST00000409766 DCAF16Q9NXF7 216 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 RAXQ9Y2V3 346 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 TSPAN4O14817 238 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 RAB29O14966 203 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 HAPLN4Q86UW8 402 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 CD300LFQ8TDQ1 290 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 ABHD14AQ9BUJ0 271 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 FAM234AQ9H0X4 552 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 ZNF665Q9H7R5 613 aa16.67■□□□□ 0.26
USP39-204ENST00000409766 KALRNO60229 2985 aa16.66■□□□□ 0.26
USP39-204ENST00000409766 IRF2P14316 349 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms