RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PIMREGQ9BSJ6 248 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 TMEM56-RWDD3S4R434 201 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 FXYD6-FXYD2A0A087WZ82 144 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 A0A1W2PPH5 198 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 C17orf98A8MV24 154 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 RAB29O14966 203 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 SCGB1D2O95969 90 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 LIPFP07098 398 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 ZFP36P26651 326 aaKnown RBP10.19□□□□□ -0.78
CHMP3-204ENST00000409727 ARF6P62330 175 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 CATR1Q13166 79 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 SLC25A48Q6ZT89 311 aaKnown RBP10.19□□□□□ -0.78
CHMP3-204ENST00000409727 FOXRED2Q8IWF2 684 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 ODF3L1Q8IXM7 274 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 RNASE11Q8TAA1 199 aaKnown RBP10.19□□□□□ -0.78
CHMP3-204ENST00000409727 RBPMSQ93062 196 aaKnown RBP10.19□□□□□ -0.78
CHMP3-204ENST00000409727 RAB39BQ96DA2 213 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 C2orf50Q96LR7 162 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 HSD17B10Q99714 261 aaKnown RBP10.19□□□□□ -0.78
CHMP3-204ENST00000409727 PLSCR3Q9NRY6 295 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 ARHGAP32A7KAX9 2087 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 TRAV14DV4A0A0A6YYC5 116 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 EPHA1P21709 976 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 COX7A1P24310 79 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 DUTP33316 252 aaKnown RBP10.19□□□□□ -0.78
CHMP3-204ENST00000409727 LPAR6P43657 344 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 S100A10P60903 97 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 ZNF585BQ52M93 769 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 NCR3LG1Q68D85 454 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 SPAG16Q8N0X2 631 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 ABHD12Q8N2K0 398 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 OR10X1Q8NGY0 326 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 C8orf46Q8TAG6 207 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 NMES1Q9C002 83 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 TMEM133Q9H2Q1 129 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 LPAR2Q9HBW0 351 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 SESN1Q9Y6P5 492 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 SPG11Q96JI7 2443 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 TENM4Q6N022 2769 aa10.19□□□□□ -0.78
CHMP3-204ENST00000409727 USP9YO00507 2555 aaPredicted RBP10.18□□□□□ -0.78
CHMP3-204ENST00000409727 ITGB1BP1O14713 200 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 NXPH3O95157 252 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 IGKV1-39P01597 117 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 IGKV1D-39P04432 117 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 REG1BP48304 166 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 CYCSP99999 105 aaKnown RBP10.18□□□□□ -0.78
CHMP3-204ENST00000409727 SRSF4Q08170 494 aaKnown RBP10.18□□□□□ -0.78
CHMP3-204ENST00000409727 MSMO1Q15800 293 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 IZUMO4Q1ZYL8 232 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 ZNF66Q6ZN08 573 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 LY6G5BQ8NDX9 201 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 C10orf105Q8TEF2 133 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 ASB13Q8WXK3 278 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 BARX1Q9HBU1 254 aaPredicted RBP10.18□□□□□ -0.78
CHMP3-204ENST00000409727 SIRT7Q9NRC8 400 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 TMED3Q9Y3Q3 217 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 HSPB11Q9Y547 144 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 DOPEY2Q9Y3R5 2298 aa10.18□□□□□ -0.78
CHMP3-204ENST00000409727 IGHV4-30-2A0A087WSY4 118 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 KIAA1324LA8MWY0 1029 aaPredicted RBP10.17□□□□□ -0.78
CHMP3-204ENST00000409727 J3QR06 171 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 ARPC5O15511 151 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 KCNAB3O43448 404 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 FCGR3BO75015 233 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 B3GALNT1O75752 331 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 AKR1C2P52895 323 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 BRWD1-AS2P59051 145 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 LMO4P61968 165 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 PSMG3-AS1Q96PY0 264 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 ARID1AO14497 2285 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 IGHV4-61A0A0C4DH41 118 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 A0A0G2JRQ6 117 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 hCG_1809904A0A1W2PP81 198 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 A0A1W2PPE2 198 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 A0A1W2PR64 198 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 A0A1W2PRV1 198 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 TOR1AO14656 332 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 S1PR2O95136 353 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 MPC2O95563 127 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 KRASP01116 189 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 PSMB6P28072 239 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 SSTR2P30874 369 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 G6PCP35575 357 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 AP2S1P53680 142 aaPredicted RBP10.17□□□□□ -0.78
CHMP3-204ENST00000409727 FGL1Q08830 312 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 RAB32Q13637 225 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 DIAPH2-AS1Q14236 149 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 LAMTOR1Q6IAA8 161 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 PDZD9Q8IXQ8 264 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 C9orf62Q8N4C0 152 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 ZBTB8BQ8NAP8 495 aaPredicted RBP10.17□□□□□ -0.78
CHMP3-204ENST00000409727 OR9G1Q8NH87 305 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 FAM216AQ8WUB2 273 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 S1PR3Q99500 378 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 ZNF251Q9BRH9 671 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 MMP26Q9NRE1 261 aa10.17□□□□□ -0.78
CHMP3-204ENST00000409727 LSM5Q9Y4Y9 91 aaKnown RBP10.17□□□□□ -0.78
CHMP3-204ENST00000409727 FBN2P35556 2912 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 CSMD2Q7Z408 3487 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 IGHV2-26A0A0B4J1V2 119 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms