RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ASB17Q8WXJ9 295 aa0.71□□□□□ -2.3
PMS1-203ENST00000409593 SLC2A9Q9NRM0 540 aa0.71□□□□□ -2.3
PMS1-203ENST00000409593 TECTAO75443 2155 aa0.71□□□□□ -2.3
PMS1-203ENST00000409593 PSMG1O95456 288 aa0.7□□□□□ -2.3
PMS1-203ENST00000409593 LDOC1O95751 146 aaPredicted RBP0.7□□□□□ -2.3
PMS1-203ENST00000409593 UCHL1P09936 223 aa0.7□□□□□ -2.3
PMS1-203ENST00000409593 OR13C7P0DN81 318 aa0.7□□□□□ -2.3
PMS1-203ENST00000409593 NUP62P37198 522 aaPredicted RBP0.7□□□□□ -2.3
PMS1-203ENST00000409593 RAB31Q13636 194 aa0.7□□□□□ -2.3
PMS1-203ENST00000409593 NNATQ16517 81 aa0.7□□□□□ -2.3
PMS1-203ENST00000409593 TBC1D28Q2M2D7 210 aa0.7□□□□□ -2.3
PMS1-203ENST00000409593 TMEM239Q8WW34 195 aa0.7□□□□□ -2.3
PMS1-203ENST00000409593 MYH11P35749 1972 aa0.7□□□□□ -2.3
PMS1-203ENST00000409593 CRPP02741 224 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 NQO2P16083 231 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 GPX2P18283 190 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 PSMD7P51665 324 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 CARD18P57730 90 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 CTAG1AP78358 180 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 HOXC5Q00444 222 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 PLCXD2Q0VAA5 305 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 C1DQ13901 141 aaKnown RBP0.69□□□□□ -2.3
PMS1-203ENST00000409593 TMEM42Q69YG0 159 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 OR10K2Q6IF99 312 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 ST13P4Q8IZP2 240 aaPredicted RBP0.69□□□□□ -2.3
PMS1-203ENST00000409593 OR51H1Q8NH63 302 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 CCDC127Q96BQ5 260 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 SNX10Q9Y5X0 201 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 ARFGEF3Q5TH69 2177 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 PTPRBP23467 1997 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 POLEQ07864 2286 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 PHYHO14832 338 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 IGLV3-27P01718 113 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 CD24P25063 80 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 AKR1C3P42330 323 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 TAS2R30P59541 319 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 SLC36A2Q495M3 483 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 XKRXQ6PP77 449 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 RPS4Y2Q8TD47 263 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 NKX6-2Q9C056 277 aaPredicted RBP0.69□□□□□ -2.3
PMS1-203ENST00000409593 VCX3BQ9H321 246 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 NRBP2Q9NSY0 501 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 GLS2Q9UI32 602 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 ENPP5Q9UJA9 477 aa0.69□□□□□ -2.3
PMS1-203ENST00000409593 IGHV3-64A0A075B6Q5 118 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 IGKV2D-26A0A0A0MRZ7 120 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 F8W036 122 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 TXNDC9O14530 226 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 ASS1P00966 412 aaKnown RBP0.68□□□□□ -2.3
PMS1-203ENST00000409593 CRYBA1P05813 215 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 ADORA1P30542 326 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 CCR7P32248 378 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 CCR2P41597 374 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 DAPP51397 102 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 TNFAIP8L1Q8WVP5 186 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 ACY3Q96HD9 319 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 CST9LQ9H4G1 147 aa0.68□□□□□ -2.3
PMS1-203ENST00000409593 H0YC42 278 aa0.67□□□□□ -2.3
PMS1-203ENST00000409593 BHLHE40O14503 412 aa0.67□□□□□ -2.3
PMS1-203ENST00000409593 CDK9P50750 372 aaKnown RBP0.67□□□□□ -2.3
PMS1-203ENST00000409593 GNA12Q03113 381 aa0.67□□□□□ -2.3
PMS1-203ENST00000409593 CDK5R1Q15078 307 aa0.67□□□□□ -2.3
PMS1-203ENST00000409593 FP248Q71RG6 208 aaPredicted RBP0.67□□□□□ -2.3
PMS1-203ENST00000409593 CNPY4Q8N129 248 aa0.67□□□□□ -2.3
PMS1-203ENST00000409593 OR51T1Q8NGJ9 327 aa0.67□□□□□ -2.3
PMS1-203ENST00000409593 MS4A12Q9NXJ0 267 aa0.67□□□□□ -2.3
PMS1-203ENST00000409593 TAAR3PQ9P1P4 343 aa0.67□□□□□ -2.3
PMS1-203ENST00000409593 MRM2Q9UI43 246 aaKnown RBP0.67□□□□□ -2.3
PMS1-203ENST00000409593 MEIKINA0A087WXM9 373 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 NDUFS8O00217 210 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 ARL6IP5O75915 188 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 CST4P01036 141 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 LIMS3P0CW19 117 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 LIMS4P0CW20 117 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 HSPA9P38646 679 aaKnown RBP0.66□□□□□ -2.3
PMS1-203ENST00000409593 CA7P43166 264 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 STC1P52823 247 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 OR2D3Q8NGH3 330 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 CLDND2Q8NHS1 167 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 TMEM56Q96MV1 263 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 DOHHQ9BU89 302 aa0.66□□□□□ -2.3
PMS1-203ENST00000409593 KLK5Q9Y337 293 aaPredicted RBP0.66□□□□□ -2.3
PMS1-203ENST00000409593 SULT1C2O00338 296 aa0.65□□□□□ -2.3
PMS1-203ENST00000409593 GSTZ1O43708 216 aaPredicted RBP0.65□□□□□ -2.3
PMS1-203ENST00000409593 AGTR1P30556 359 aa0.65□□□□□ -2.3
PMS1-203ENST00000409593 SURF2Q15527 256 aaPredicted RBP0.65□□□□□ -2.3
PMS1-203ENST00000409593 DAND5Q8N907 189 aa0.65□□□□□ -2.3
PMS1-203ENST00000409593 SMCR5Q8TEV8 140 aa0.65□□□□□ -2.3
PMS1-203ENST00000409593 CCDC12Q8WUD4 166 aaPredicted RBP0.65□□□□□ -2.3
PMS1-203ENST00000409593 FAM210AQ96ND0 272 aa0.65□□□□□ -2.3
PMS1-203ENST00000409593 UGT2B28Q9BY64 529 aa0.65□□□□□ -2.3
PMS1-203ENST00000409593 EIF5A2Q9GZV4 153 aaKnown RBP0.65□□□□□ -2.3
PMS1-203ENST00000409593 SYNE2Q8WXH0 6885 aaKnown RBP0.65□□□□□ -2.31
PMS1-203ENST00000409593 SGCEO43556 437 aa0.65□□□□□ -2.31
PMS1-203ENST00000409593 MRPS14O60783 128 aaKnown RBP0.65□□□□□ -2.31
PMS1-203ENST00000409593 UGT2B11O75310 529 aa0.65□□□□□ -2.31
PMS1-203ENST00000409593 TNFAIP8O95379 198 aa0.65□□□□□ -2.31
PMS1-203ENST00000409593 CCL2P13500 99 aa0.65□□□□□ -2.31
PMS1-203ENST00000409593 TMEM249Q2WGJ8 235 aa0.65□□□□□ -2.31
PMS1-203ENST00000409593 KTN1-AS1Q86SY8 53 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms