RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TFAP2AP05549 437 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 OR8U8P0C7N1 319 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 PSMB8P28062 276 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 PSMB9P28065 219 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 FGF9P31371 208 aaPredicted RBP7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 CLDN12P56749 244 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 DGCR2P98153 550 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 ARFRP1Q13795 201 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 SSX1Q16384 188 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 SRSF7Q16629 238 aaKnown RBP eCLIP7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 UBE2UQ5VVX9 321 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 LCNL1Q6ZST4 164 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 TPRA1Q86W33 373 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 OR5AN1Q8NGI8 311 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 OR10R2Q8NGX6 335 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 OR10J5Q8NHC4 309 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 ABHD5Q8WTS1 349 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 ABHD14BQ96IU4 210 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 UBE2E2Q96LR5 201 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 GFI1Q99684 422 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 TOLLIPQ9H0E2 274 aa7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 FOXA2Q9Y261 457 aaPredicted RBP7.12□□□□□ -1.27
SNORD88A-201ENST00000408314 IGHV7-81A0A0B4J1V7 117 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 H0YJW9 148 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 FCGR3AP08637 254 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 SCTP09683 121 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 CT45A6P0DMU7 189 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 CT45A5P0DMU8 189 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 CT45A7P0DMV0 189 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 RRASP10301 218 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 HIST1H1DP16402 221 aaKnown RBP7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 INSL3P51460 131 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 CRIP2P52943 208 aaPredicted RBP7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 TMEM50BP56557 158 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 PITPNAQ00169 270 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 RUNX1Q01196 453 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 ECSCRQ19T08 205 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 RPL39P5Q59GN2 51 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 MYOZ3Q8TDC0 251 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 FLYWCH2Q96CP2 140 aaKnown RBP7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 RAX2Q96IS3 184 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 ADTRPQ96IZ2 230 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 GINS4Q9BRT9 223 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 AGMATQ9BSE5 352 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 HDHD3Q9BSH5 251 aaPredicted RBP7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 CABLES2Q9BTV7 478 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 SLA2Q9H6Q3 261 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 RDH8Q9NYR8 311 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 OR1A1Q9P1Q5 309 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 STUB1Q9UNE7 303 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 SSR3Q9UNL2 185 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 GAB2Q9UQC2 676 aa7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 RBM7Q9Y580 266 aaKnown RBP7.11□□□□□ -1.27
SNORD88A-201ENST00000408314 TRBV6-7A0A0A0MS04 114 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 NOTOA8MTQ0 251 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 SEC14L6B5MCN3 397 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 M0R1X1 148 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 MFNGO00587 321 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 BET1O15155 118 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 CREBL2O60519 120 aaPredicted RBP7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 TMEM127O75204 238 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 SLC22A5O76082 557 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 IGLV1-40P01703 118 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 CTXN2P0C2S0 81 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 DTYMKP23919 212 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 PPIFP30405 207 aaKnown RBP7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 LGALS7P47929 136 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 SCAND1P57086 179 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 ZNF616Q08AN1 781 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 FHL3Q13643 280 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 RTL8BQ17RB0 113 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 PLAC9Q5JTB6 97 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 C22orf42Q6IC83 251 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 ZNF562Q6V9R5 426 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 Q6ZS49 121 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 MINDY2Q8NBR6 621 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 TMEM68Q96MH6 324 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 ATG5Q9H1Y0 275 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 FBXL15Q9H469 300 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 SLC35D1Q9NTN3 355 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 METTL1Q9UBP6 276 aaKnown RBP7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 WSB1Q9Y6I7 421 aa7.1□□□□□ -1.27
SNORD88A-201ENST00000408314 A0A075B6Q4 140 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 A0A1W2PN81 502 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 H3BUA1 57 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 RAB27BO00194 218 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 GNB3P16520 340 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 CNTFRP26992 372 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 HOXD3P31249 432 aaPredicted RBP7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 CHRNA7P36544 502 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 RAB9AP51151 201 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 OR10A3P58181 314 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 RPS16P62249 146 aaKnown RBP7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 CX3CL1P78423 397 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 PSG5Q15238 335 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 DEFB136Q30KP8 78 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 TIMM50Q3ZCQ8 353 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 AKIRIN2Q53H80 203 aa7.09□□□□□ -1.27
SNORD88A-201ENST00000408314 ACTBL2Q562R1 376 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms