RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TRDCB7Z8K6 153 aa15.03■□□□□ -0
SMARCB1-204ENST00000407422 H7C2Y5 167 aa15.03■□□□□ -0
SMARCB1-204ENST00000407422 FCN1O00602 326 aa15.03■□□□□ -0
SMARCB1-204ENST00000407422 IGLV1-40P01703 118 aa15.03■□□□□ -0
SMARCB1-204ENST00000407422 LUMP51884 338 aaPredicted RBP15.03■□□□□ -0
SMARCB1-204ENST00000407422 PTX4Q96A99 478 aa15.03■□□□□ -0
SMARCB1-204ENST00000407422 GHITMQ9H3K2 345 aa15.03■□□□□ -0
SMARCB1-204ENST00000407422 GNB4Q9HAV0 340 aa15.03■□□□□ -0
SMARCB1-204ENST00000407422 TRDV1A0A1B0GX56 115 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 IFITM5A6NNB3 132 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 RRHO14718 337 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 PDCD5O14737 125 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 GSTP1P09211 210 aaKnown RBP15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 CD3GP09693 182 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 MC5RP33032 325 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 TMEM65Q6PI78 240 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 OR11H1Q8NG94 326 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 RAB3CQ96E17 227 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 RDH8Q9NYR8 311 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 WASHC3Q9Y3C0 194 aa15.02□□□□□ -0.01
SMARCB1-204ENST00000407422 ATP6V1G2O95670 118 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 CX3CL1P78423 397 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 FHL3Q13643 280 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 ECSCRQ19T08 205 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 C22orf42Q6IC83 251 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 NR2C2APQ86WQ0 139 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 ZNF491Q8N8L2 437 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 ZNF383Q8NA42 475 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 MINDY2Q8NBR6 621 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 OR5M8Q8NGP6 311 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 OR5B12Q96R08 314 aa15.01□□□□□ -0.01
SMARCB1-204ENST00000407422 A0A075B6Q4 140 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 SMIM30A4D0T7 59 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 IGKV1-16P04430 117 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 GNB3P16520 340 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 MYL9P24844 172 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 PLGLAQ15195 96 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 C19orf54Q5BKX5 351 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 IGSF11Q5DX21 431 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 OR10R2Q8NGX6 335 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 CASTOR1Q8WTX7 329 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 UBE2E2Q96LR5 201 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 ZNF230Q9UIE0 474 aaPredicted RBP15□□□□□ -0.01
SMARCB1-204ENST00000407422 GAB2Q9UQC2 676 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 A3GALT2U3KPV4 340 aa15□□□□□ -0.01
SMARCB1-204ENST00000407422 RAB27BO00194 218 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 FABP7O15540 132 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 SOX15O60248 233 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 FCGR3AP08637 254 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 EGR2P11161 476 aaPredicted RBP14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 RAB3BP20337 219 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 RANBP1P43487 201 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 RAB9AP51151 201 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 GABARAPL2P60520 117 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 ZNF660Q6AZW8 331 aaPredicted RBP14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 OR4A4PQ8NGN8 299 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 MAFIPQ8WZ33 124 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 ZNF221Q9UK13 617 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 I3L521 148 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 MFNGO00587 321 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 BET1O15155 118 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 RBBP9O75884 186 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 GSTT2P0CG29 244 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 GSTT2BP0CG30 244 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 GNB1P62873 340 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 MRPS15P82914 257 aaKnown RBP14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 DGCR2P98153 550 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 ASPHD1Q5U4P2 390 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 SPARTQ8N0X7 666 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 CLCC1Q96S66 551 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 VSIG4Q9Y279 399 aa14.99□□□□□ -0.01
SMARCB1-204ENST00000407422 A0A1W2PN81 502 aa14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 HIST1H1DP16402 221 aaKnown RBP14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 RAB6AP20340 208 aa14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 CHRNA7P36544 502 aa14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 CRIP2P52943 208 aaPredicted RBP14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 PSG5Q15238 335 aa14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 UBE2UQ5VVX9 321 aa14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 ABHD5Q8WTS1 349 aa14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 RNF5Q99942 180 aa14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 FAM103A1Q9BTL3 118 aaKnown RBP14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 METTL1Q9UBP6 276 aaKnown RBP14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 SCOCQ9UIL1 159 aa14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 NUBP2Q9Y5Y2 271 aa14.98□□□□□ -0.01
SMARCB1-204ENST00000407422 SEC14L6B5MCN3 397 aa14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 M0R1X1 148 aa14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 TFAP2AP05549 437 aa14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 GALP22466 123 aa14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 RUNX1Q01196 453 aa14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 OR1N2Q8NGR9 330 aa14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 CABLES2Q9BTV7 478 aa14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 TOLLIPQ9H0E2 274 aa14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 ALX4Q9H161 411 aaPredicted RBP14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 TPSG1Q9NRR2 321 aa14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 ELF5Q9UKW6 265 aaPredicted RBP14.97□□□□□ -0.01
SMARCB1-204ENST00000407422 MRPS14O60783 128 aaKnown RBP14.96□□□□□ -0.01
SMARCB1-204ENST00000407422 OR8U9P0C7N5 309 aa14.96□□□□□ -0.01
SMARCB1-204ENST00000407422 GADD45AP24522 165 aa14.96□□□□□ -0.01
SMARCB1-204ENST00000407422 PSMB9P28065 219 aa14.96□□□□□ -0.01
SMARCB1-204ENST00000407422 SERPINB10P48595 397 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms