RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 C12orf49Q9H741 205 aa6.34□□□□□ -1.39
HDAC9-202ENST00000405010 SH2D2AQ9NP31 389 aa6.34□□□□□ -1.39
HDAC9-202ENST00000405010 RAB9BQ9NP90 201 aa6.34□□□□□ -1.39
HDAC9-202ENST00000405010 IGKV1D-13A0A0B4J2D9 117 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 DPRXA6NFQ7 191 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 DEFB108AA8MXU0 73 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 C1QTNF9BB2RNN3 333 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 APCSP02743 223 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 IGKV1-13P0DP09 117 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 PSG4Q00888 419 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 PSG5Q15238 335 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 MMDQ15546 238 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 DCAF10Q5QP82 559 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 Q6ZS52 159 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 WDFY1Q8IWB7 410 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 TMEM191AQ9H0A3 160 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 DUSP15Q9H1R2 295 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-202ENST00000405010 ASCL3Q9NQ33 180 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 TBL2Q9Y4P3 447 aaKnown RBP6.33□□□□□ -1.4
HDAC9-202ENST00000405010 PLXNA2O75051 1894 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A10PA6NDY2 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A18PA6NE21 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A16PA6NEW6 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A20PA6NIJ5 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A8PA6NJQ4 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A7PA6NKC0 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A22PA8MWA6 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A12PA8MX19 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A5PA8MXJ8 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A23PA8MXZ1 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A15PP0C7V4 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A13PP0C7W8 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A14PP0C7W9 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A24PP0C7X0 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 SRIP30626 198 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 TBC1D28Q2M2D7 210 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 VASH2Q86V25 355 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 C1orf147Q96MC9 270 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-202ENST00000405010 ALKBH7Q9BT30 221 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-202ENST00000405010 LRFN3Q9BTN0 628 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 TPPP3Q9BW30 176 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 GSX1Q9H4S2 264 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-202ENST00000405010 IFITM10A6NMD0 228 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM157AC9JC47 383 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 FAM90A26D6RGX4 464 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 TIMM8AO60220 97 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-202ENST00000405010 RAB30Q15771 203 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 MMD2Q8IY49 270 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 Q8IYB0 196 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 CADM4Q8NFZ8 388 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 OR10D3Q8NH80 312 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 IFI44Q8TCB0 444 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 LPAR2Q9HBW0 351 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 ANAPC10Q9UM13 185 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 IGHV3-43A0A0B4J1X8 118 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 A0A0J9YW62 118 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 SLC17A3O00476 420 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 PIAS2O75928 621 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 C1QTNF9P0C862 333 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 IGHV3-43DP0DP04 118 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 ADMP35318 185 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 MFAP2P55001 183 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 CALHM1Q8IU99 346 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 AGBL5Q8NDL9 886 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 HSD17B10Q99714 261 aaKnown RBP6.33□□□□□ -1.4
HDAC9-202ENST00000405010 DUSP23Q9BVJ7 150 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 SF3B5Q9BWJ5 86 aaKnown RBP6.33□□□□□ -1.4
HDAC9-202ENST00000405010 ZFP30Q9Y2G7 519 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 TIMM9Q9Y5J7 89 aa6.33□□□□□ -1.4
HDAC9-202ENST00000405010 CHD3Q12873 2000 aaKnown RBP6.32□□□□□ -1.4
HDAC9-202ENST00000405010 LINC01565O15544 149 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 ZNHIT1O43257 154 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 CRYABP02511 175 aaKnown RBP6.32□□□□□ -1.4
HDAC9-202ENST00000405010 IGHV4-34P06331 123 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 PFN1P07737 140 aaKnown RBP6.32□□□□□ -1.4
HDAC9-202ENST00000405010 TNFSF4P23510 183 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 ATP5G3P48201 142 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 CYB561P49447 251 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 ARG2P78540 354 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 KCNMB1Q16558 191 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 OR5A2Q8NGI9 324 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 TMEM167BQ9NRX6 74 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 OR1A1Q9P1Q5 309 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 POLR3KQ9Y2Y1 108 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-202ENST00000405010 PXMP4Q9Y6I8 212 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 ICE1Q9Y2F5 2266 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 IGKV3D-11A0A0A0MRZ8 115 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 C5orf63A6NC05 138 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 ZG16O60844 167 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 NAPSAO96009 420 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 HLA-DQA1P01909 254 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 ARL14EPLP0DKL9 152 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 MAS1LP35410 378 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 UCP2P55851 309 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 SOX8P57073 446 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 KLF3P57682 345 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-202ENST00000405010 SELENOVP59797 346 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-202ENST00000405010 TRAT1Q6PIZ9 186 aa6.32□□□□□ -1.4
HDAC9-202ENST00000405010 MRGPRDQ8TDS7 321 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms