RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 SEC14L6B5MCN3 397 aa15.76■□□□□ 0.11
USP48-204ENST00000400301 TNFRSF9Q07011 255 aa15.76■□□□□ 0.11
USP48-204ENST00000400301 ZNF880Q6PDB4 577 aa15.76■□□□□ 0.11
USP48-204ENST00000400301 TMEM108Q6UXF1 575 aa15.76■□□□□ 0.11
USP48-204ENST00000400301 TMEM18Q96B42 140 aa15.76■□□□□ 0.11
USP48-204ENST00000400301 YIF1AO95070 293 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 TMEM42Q69YG0 159 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 LRTM2Q8N967 370 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 SNX22Q96L94 193 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 ABHD14AQ9BUJ0 271 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 ZDHHC11Q9H8X9 412 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 CEACAM18A8MTB9 384 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 SMPD2O60906 423 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 P2RY6Q15077 328 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 BATFQ16520 125 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 FDCSPQ8NFU4 85 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 CCL17Q92583 94 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 hADV38S2A0JD32 116 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 S1PR2O95136 353 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 MDKP21741 143 aaPredicted RBP15.75■□□□□ 0.11
USP48-204ENST00000400301 KIR2DS2P43631 304 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 DMRTA2Q96SC8 542 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 MGST3O14880 152 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 Q6ZT83 130 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 PROK2Q9HC23 129 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 RNF7Q9UBF6 113 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 MIOXQ9UGB7 285 aa15.75■□□□□ 0.11
USP48-204ENST00000400301 J3QW42 95 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 TMPRSS2O15393 492 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 CLDN14O95500 239 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 RHOBP62745 196 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 PSG7Q13046 419 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 SLC35D1Q9NTN3 355 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 NDUFB3O43676 98 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 FAM157CP0CG43 387 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 HOXB1P14653 301 aaPredicted RBP15.74■□□□□ 0.11
USP48-204ENST00000400301 FAM78BQ5VT40 261 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 STUMQ69YW2 141 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 OR2T10Q8NGZ9 312 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 AURKAIP1Q9NWT8 199 aaPredicted RBP15.74■□□□□ 0.11
USP48-204ENST00000400301 FAM90A26D6RGX4 464 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 OR10A7Q8NGE5 316 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 OR2V2Q96R30 315 aa15.74■□□□□ 0.11
USP48-204ENST00000400301 TRAV24A0A0B4J272 114 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 ZG16O60844 167 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 SSTR5P35346 364 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 MEF2BQ02080 365 aaPredicted RBP15.73■□□□□ 0.11
USP48-204ENST00000400301 ADTRPQ96IZ2 230 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 C12orf77C9JDV5 145 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 ERVFC1-1P60608 527 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 GNB1P62873 340 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 RSPO1Q2MKA7 263 aaPredicted RBP15.73■□□□□ 0.11
USP48-204ENST00000400301 WDYHV1Q96HA8 205 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 CTDSP1Q9GZU7 261 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 GP6Q9HCN6 339 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 XKRY2A2RUG3 117 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 MPV17P39210 176 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 OR4D5Q8NGN0 318 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 PLPPR1Q8TBJ4 325 aa15.73■□□□□ 0.11
USP48-204ENST00000400301 CD1BP29016 333 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 TRAPPC1Q9Y5R8 145 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 ODAMA1E959 279 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 AHRRA9YTQ3 701 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 HFEQ30201 348 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 LRRC10Q5BKY1 277 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 SH2D2AQ9NP31 389 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 CNIH1O95406 144 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 HPRT1P00492 218 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 DVL1O14640 695 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 TRGC2P03986 189 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 VWA1Q6PCB0 445 aa15.72■□□□□ 0.11
USP48-204ENST00000400301 TRGV8A0A0C4DH27 118 aa15.71■□□□□ 0.11
USP48-204ENST00000400301 DEFA4P12838 97 aa15.71■□□□□ 0.11
USP48-204ENST00000400301 ID3Q02535 119 aa15.71■□□□□ 0.11
USP48-204ENST00000400301 SPSB4Q96A44 273 aa15.71■□□□□ 0.11
USP48-204ENST00000400301 SLX1AQ9BQ83 275 aa15.71■□□□□ 0.11
USP48-204ENST00000400301 ZNF331Q9NQX6 463 aaPredicted RBP15.71■□□□□ 0.11
USP48-204ENST00000400301 SCGB2A1O75556 95 aa15.71■□□□□ 0.11
USP48-204ENST00000400301 IGHV1-2P23083 117 aa15.71■□□□□ 0.11
USP48-204ENST00000400301 TNFSF10P50591 281 aa15.71■□□□□ 0.11
USP48-204ENST00000400301 ANAPC10Q9UM13 185 aa15.71■□□□□ 0.11
USP48-204ENST00000400301 DIDO1Q9BTC0 2240 aaKnown RBP15.71■□□□□ 0.11
USP48-204ENST00000400301 MARCH11A6NNE9 402 aa15.71■□□□□ 0.1
USP48-204ENST00000400301 COX7A2P2O60397 106 aa15.71■□□□□ 0.1
USP48-204ENST00000400301 NPY1RP25929 384 aa15.71■□□□□ 0.1
USP48-204ENST00000400301 B2MP61769 119 aa15.71■□□□□ 0.1
USP48-204ENST00000400301 UBE2G1P62253 170 aa15.71■□□□□ 0.1
USP48-204ENST00000400301 TCTEX1D1Q8N7M0 179 aa15.71■□□□□ 0.1
USP48-204ENST00000400301 ITLN1Q8WWA0 313 aa15.71■□□□□ 0.1
USP48-204ENST00000400301 RCC1LQ96I51 464 aaKnown RBP15.71■□□□□ 0.1
USP48-204ENST00000400301 CYB5R3P00387 301 aaPredicted RBP15.7■□□□□ 0.1
USP48-204ENST00000400301 CD5P06127 495 aa15.7■□□□□ 0.1
USP48-204ENST00000400301 CT45A6P0DMU7 189 aa15.7■□□□□ 0.1
USP48-204ENST00000400301 CT45A5P0DMU8 189 aa15.7■□□□□ 0.1
USP48-204ENST00000400301 CT45A7P0DMV0 189 aa15.7■□□□□ 0.1
USP48-204ENST00000400301 WNT5AP41221 380 aa15.7■□□□□ 0.1
USP48-204ENST00000400301 CT45A1Q5HYN5 189 aa15.7■□□□□ 0.1
USP48-204ENST00000400301 CT45A3Q8NHU0 189 aa15.7■□□□□ 0.1
USP48-204ENST00000400301 RHOVQ96L33 236 aa15.7■□□□□ 0.1
USP48-204ENST00000400301 GAL3ST2Q9H3Q3 398 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms