RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 LIN7CQ9NUP9 197 aaKnown RBP6.04□□□□□ -1.44
USP16-204ENST00000399976 KLK9Q9UKQ9 250 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 VENTXO95231 258 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 MOSP00540 346 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 OR5H8P0DN80 308 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 COX7A1P24310 79 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 NFYBP25208 207 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 LGALS7P47929 136 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 BRD3OSQ6XYD6 125 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 PRIMA1Q86XR5 153 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 SLC38A6Q8IZM9 456 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 BCL6BQ8N143 479 aaPredicted RBP6.04□□□□□ -1.44
USP16-204ENST00000399976 OR4A5Q8NH83 315 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 OSR1Q8TAX0 266 aaPredicted RBP6.04□□□□□ -1.44
USP16-204ENST00000399976 ABHD14BQ96IU4 210 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 SCGB3A2Q96PL1 93 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 SSX3Q99909 188 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 GINS4Q9BRT9 223 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 ESM1Q9NQ30 184 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 WASHC3Q9Y3C0 194 aa6.04□□□□□ -1.44
USP16-204ENST00000399976 FABP12A6NFH5 140 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 CREBL2O60519 120 aaPredicted RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 PPYP01298 95 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 AKAIN1P0CW23 69 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 PPP1CCP36873 323 aaKnown RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 UBE2MP61081 183 aaKnown RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 GNMTQ14749 295 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 THOC7Q6I9Y2 204 aaKnown RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 OR4F5Q8NH21 305 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 WIPF2Q8TF74 440 aaPredicted RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 TMEM68Q96MH6 324 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 PRRT1Q99946 306 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 NPFFR1Q9GZQ6 430 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 SRRQ9GZT4 340 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 COMMD9Q9P000 198 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 CACFD1Q9UGQ2 172 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 IGKV1D-8A0A087WSZ0 117 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 ZNF736B4DX44 427 aaPredicted RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 H0YJW9 148 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 HSPA12AO43301 675 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 HOXA3O43365 443 aaPredicted RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 GPR137BO60478 399 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 IGLV2-14P01704 120 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 RPA2P15927 270 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 MAS1LP35410 378 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 GPR12P47775 334 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 PPP5CP53041 499 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 ZNF79Q15937 498 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 IGSF11Q5DX21 431 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 LHFPL4Q7Z7J7 247 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 DYNAPQ8N1N2 210 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 COMMD1Q8N668 190 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 SETD6Q8TBK2 473 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 TSNAXQ99598 290 aaKnown RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 SRSF8Q9BRL6 282 aaKnown RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 C6orf62Q9GZU0 229 aaPredicted RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 OR1A1Q9P1Q5 309 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 VPS13CQ709C8 3753 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 SLC31A2O15432 143 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 KCNAB3O43448 404 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 HLA-DRB1P01911 266 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 APOA2P02652 100 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 FCER2P06734 321 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 S100GP29377 79 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 DUTP33316 252 aaKnown RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 CATR1Q13166 79 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 KLF9Q13886 244 aaPredicted RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 OR52I2Q8NH67 350 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 SPATA3Q8NHX4 192 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 RFESDQ8TAC1 157 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 GCDHQ92947 438 aaPredicted RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 SDHAF2Q9NX18 166 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 MRPS7Q9Y2R9 242 aaKnown RBP6.03□□□□□ -1.44
USP16-204ENST00000399976 NAV3Q8IVL0 2385 aa6.03□□□□□ -1.44
USP16-204ENST00000399976 DISC1C4P0D8 188 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 RGS5O15539 181 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 ZNF735P0CB33 412 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 CT45A6P0DMU7 189 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 CT45A5P0DMU8 189 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 CT45A7P0DMV0 189 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 OMGP23515 440 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 SLC6A1P30531 599 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 OR3A3P47888 321 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 IL18Q14116 193 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 RNASE10Q5GAN6 216 aaKnown RBP6.02□□□□□ -1.45
USP16-204ENST00000399976 IL17RELQ6ZVW7 336 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 FAM71E2Q8N5Q1 922 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 OR4C13Q8NGP0 309 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 OR6F1Q8NGZ6 308 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 ST6GALNAC5Q9BVH7 336 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 FXYD6Q9H0Q3 95 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 FN1P02751 2386 aaKnown RBP6.02□□□□□ -1.45
USP16-204ENST00000399976 H3BUX3 64 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 TIMM23O14925 209 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 PTTG1O95997 202 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 CRYGBP07316 175 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 CTSDP07339 412 aaPredicted RBP6.02□□□□□ -1.45
USP16-204ENST00000399976 IL6RP08887 468 aaPredicted RBP6.02□□□□□ -1.45
USP16-204ENST00000399976 RFX2P48378 723 aa6.02□□□□□ -1.45
USP16-204ENST00000399976 RTL8BQ17RB0 113 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms