RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 PTBP3O95758 552 aaKnown RBP10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 RECKO95980 971 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 HLA-DRB5Q30154 266 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 C12orf54Q6X4T0 127 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 IGHV3-66A0A0C4DH42 116 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 ANKRD20A5PA0PJZ0 165 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 CLDN34H7C241 214 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 DLX6P56179 175 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 MEIG1Q5JSS6 88 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 LRP11Q86VZ4 500 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 NEU1Q99519 415 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 PRSS27Q9BQR3 290 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 QTRT1Q9BXR0 403 aaKnown RBP10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 AKIRIN1Q9H9L7 192 aaPredicted RBP10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 TRIP12Q14669 1992 aaPredicted RBP10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 TDRD15B5MCY1 1934 aaKnown RBP10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 A0A1W2PR77 199 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 PAGE4O60829 102 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 PLAUP00749 431 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 IGKV1D-33P01593 117 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 IGKV1-33P01594 117 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 CD33P20138 364 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 TMEM30BQ3MIR4 351 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 RTN4RL2Q86UN3 420 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 PKIBQ9C010 78 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 SLC35B3Q9H1N7 401 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 GP6Q9HCN6 339 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 HSPB7Q9UBY9 170 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 NUDT3O95989 172 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 CRYBB2P43320 205 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 SSX1Q16384 188 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 C1QTNF12Q5T7M4 302 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 PPP1R27Q86WC6 154 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 TCTEX1D1Q8N7M0 179 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 TMEM191AQ9H0A3 160 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 C19orf67A6NJJ6 358 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 ADAP1O75689 374 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 TIAF1O95411 115 aa10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 CFDP00746 253 aaPredicted RBP10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 HINT1P49773 126 aaPredicted RBP10.37□□□□□ -0.75
CACNA1C-213ENST00000399629 RBFOX3A6NFN3 312 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 RND2P52198 227 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 CD81P60033 236 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 HIST3H3Q16695 136 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 DMKNQ6E0U4 476 aaPredicted RBP10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 RCC2Q9P258 522 aaKnown RBP10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 PXMP4Q9Y6I8 212 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 SMCHD1A6NHR9 2005 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 FGF9P31371 208 aaPredicted RBP10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 OR4D11Q8NGI4 311 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 COPS9Q8WXC6 57 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 SLC25A28Q96A46 364 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 TMEM204Q9BSN7 226 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 TOLLIPQ9H0E2 274 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 IL36RNQ9UBH0 155 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 JPT1Q9UK76 154 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 MYO16Q9Y6X6 1858 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 TNS1Q9HBL0 1735 aaKnown RBP10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 ATAD5Q96QE3 1844 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 SMIM18P0DKX4 95 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 SLC25A47Q6Q0C1 308 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 ADAD2Q8NCV1 583 aaKnown RBP10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 SGMS2Q8NHU3 365 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 LSM10Q969L4 123 aaKnown RBP10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 ZNF703Q9H7S9 590 aaPredicted RBP10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 NIT2Q9NQR4 276 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 CEACAM4O75871 244 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 EWSR1Q01844 656 aaKnown RBP eCLIP10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 LYZL2Q7Z4W2 148 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 MSRB3Q8IXL7 192 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 MEGF10Q96KG7 1140 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 LYRM2Q9NU23 88 aaPredicted RBP10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 MRPS16Q9Y3D3 137 aaKnown RBP10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 TRGV2A0A075B6R0 118 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 C17orf51A8MQB3 221 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 SSTR5P35346 364 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 SELENOTP62341 195 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 SNAI3Q3KNW1 292 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 C11orf44Q8N8P7 122 aa10.36□□□□□ -0.75
CACNA1C-213ENST00000399629 TRPM6Q9BX84 2022 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 A0A1B0GVG6 124 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 OR4C45A6NMZ5 311 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 VAX2Q9UIW0 290 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 MARF1Q9Y4F3 1742 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 DXOO77932 396 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 GLRXP35754 106 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 UQCC3Q6UW78 93 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 LINC00299Q6ZSB3 139 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 SCMH1Q96GD3 660 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 C9JCJ5 164 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 FXYD1O00168 92 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 THBDP07204 575 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 GEMIN7Q9H840 131 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 ANKRD31Q8N7Z5 1873 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 MCM3APO60318 1980 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 HMGA2P52926 109 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 ELOBQ15370 118 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 FAM166AQ6J272 317 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 ATG2BQ96BY7 2078 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms