RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 DANCRP0C864 163 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 DNM1P46Q6ZS02 220 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 DEFB119Q8N690 84 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 ZNF114Q8NC26 417 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 ZBTB34Q8NCN2 500 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 OR1K1Q8NGR3 316 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 TMEM45BQ96B21 275 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 SPSB1Q96BD6 273 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 RAXQ9Y2V3 346 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 LINC01553A4QN01 128 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 HOXA3O43365 443 aaPredicted RBP8.36□□□□□ -1.07
SMAD9-203ENST00000399275 EFNB2P52799 333 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 FAM53BQ14153 422 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 GALMQ96C23 342 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 AQP10Q96PS8 301 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 HSD17B10Q99714 261 aaKnown RBP8.36□□□□□ -1.07
SMAD9-203ENST00000399275 SNHG12Q9BXW3 62 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 DOCK5Q9H7D0 1870 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 SH2D1BO14796 132 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 TRACP01848 142 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 PRSS27Q9BQR3 290 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 TMEM160Q9NX00 188 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 ANXA10Q9UJ72 324 aa8.36□□□□□ -1.07
SMAD9-203ENST00000399275 IGFBP4P22692 258 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
SMAD9-203ENST00000399275 P2RY6Q15077 328 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 NOXO1Q8NFA2 376 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 OR4A5Q8NH83 315 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 FGF14Q92915 247 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 APOBEC3DQ96AK3 386 aaPredicted RBP8.35□□□□□ -1.07
SMAD9-203ENST00000399275 GNRHR2Q96P88 292 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 C6orf106Q9H6K1 298 aaPredicted RBP8.35□□□□□ -1.07
SMAD9-203ENST00000399275 KLK13Q9UKR3 277 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 FSTP19883 344 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 MNX1P50219 401 aaPredicted RBP8.35□□□□□ -1.07
SMAD9-203ENST00000399275 ZNF714Q96N38 554 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 CDCA3Q99618 268 aaPredicted RBP8.35□□□□□ -1.07
SMAD9-203ENST00000399275 CSTL1Q9H114 145 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 ONECUT1Q9UBC0 465 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 NEUROG3Q9Y4Z2 214 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 TRAV2A0A0B4J234 112 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 COLCA2A8K830 154 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 CTSVO60911 334 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 BTCP35070 178 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 NANOS3P60323 173 aaKnown RBP8.35□□□□□ -1.07
SMAD9-203ENST00000399275 MRPS21P82921 87 aaKnown RBP8.35□□□□□ -1.07
SMAD9-203ENST00000399275 ZXDAP98168 799 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 KISS1Q15726 138 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 GFI1BQ5VTD9 330 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 OR2Z1Q8NG97 314 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 TOX2Q96NM4 488 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 YBX2Q9Y2T7 364 aaKnown RBP8.35□□□□□ -1.07
SMAD9-203ENST00000399275 TRAV21A0A0B4J279 112 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 EPPINO95925 133 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 ARID2Q68CP9 1835 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 SHISA6Q6ZSJ9 500 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 RAB1BQ9H0U4 201 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 GAGE12HA6NDE8 117 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 RRHO14718 337 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 IGHV4-39P01824 125 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 OPRK1P41145 380 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 CD300EQ496F6 205 aaPredicted RBP8.35□□□□□ -1.07
SMAD9-203ENST00000399275 COX14Q96I36 57 aa8.35□□□□□ -1.07
SMAD9-203ENST00000399275 SHISA3A0PJX4 238 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 MKRN2OSH3BPM6 223 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 UCP2P55851 309 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 ZNF260Q3ZCT1 412 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 SSMEM1Q8WWF3 244 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 HES7Q9BYE0 225 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 NPFFR1Q9GZQ6 430 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 NKX2-8O15522 239 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 VENTXO95231 258 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 TBX6O95947 436 aaPredicted RBP8.34□□□□□ -1.07
SMAD9-203ENST00000399275 CRYBA2P53672 197 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 ZNF117Q03924 483 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 TSPO2Q5TGU0 170 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 C1QL4Q86Z23 238 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 SLC37A2Q8TED4 501 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.34□□□□□ -1.07
SMAD9-203ENST00000399275 IMMP2LQ96T52 175 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 MOB4Q9Y3A3 225 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 SIPA1L1O43166 1804 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 SH2D7A6NKC9 451 aaPredicted RBP8.34□□□□□ -1.07
SMAD9-203ENST00000399275 MRPL33O75394 65 aaKnown RBP8.34□□□□□ -1.07
SMAD9-203ENST00000399275 DEFB133Q30KQ1 61 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 HEPN1Q6WQI6 88 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 LYZL2Q7Z4W2 148 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 HOGA1Q86XE5 327 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 Q8NFD4 153 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 ZNF519Q8TB69 540 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 ERRFI1Q9UJM3 462 aaPredicted RBP8.34□□□□□ -1.07
SMAD9-203ENST00000399275 TIMM10BQ9Y5J6 103 aa8.34□□□□□ -1.07
SMAD9-203ENST00000399275 OR3A4PP47883 348 aa8.34□□□□□ -1.08
SMAD9-203ENST00000399275 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.08
SMAD9-203ENST00000399275 HERV-K104P63124 156 aa8.34□□□□□ -1.08
SMAD9-203ENST00000399275 ATG4DQ86TL0 474 aaPredicted RBP8.34□□□□□ -1.08
SMAD9-203ENST00000399275 OR2V1Q8NHB1 315 aa8.34□□□□□ -1.08
SMAD9-203ENST00000399275 MVB12AQ96EY5 273 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms