RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 MPDU1O75352 247 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 MC5RP33032 325 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 GPR6P46095 362 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 CCDC144NLQ6NUI1 221 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 STXBP6Q8NFX7 210 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 ISOC2Q96AB3 205 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 SEMA5BQ9P283 1151 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 TSC2P49815 1807 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 BMI1P35226 326 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 TPPP2P59282 170 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 DLK1P80370 383 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 MRPL30Q8TCC3 161 aaKnown RBP12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 FAM103A1Q9BTL3 118 aaKnown RBP12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 SIRT7Q9NRC8 400 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 LYRM2Q9NU23 88 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 JPT1Q9UK76 154 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 DOCK8Q8NF50 2099 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 PDE6DO43924 150 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 LGALS7P47929 136 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 POC1AQ8NBT0 407 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 ANAPC16Q96DE5 110 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 GPHA2Q96T91 129 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 MS4A7Q9GZW8 240 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 CISD1Q9NZ45 108 aaKnown RBP12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 F2RL2O00254 374 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 CXorf1O96002 111 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 ERVFRD-1P60508 538 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 MMDQ15546 238 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 NAT2P11245 290 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 LHX2P50458 406 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 CALHM1Q8IU99 346 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 OR4X1Q8NH49 305 aa12.16□□□□□ -0.46
PCDHGA11-201ENST00000398587 CLDN18P56856 261 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 ZNF818PQ6ZRF7 136 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 TMEM171Q8WVE6 324 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 AKAP6Q13023 2319 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 MUC1P15941 1255 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 KLK2P20151 261 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 GLIPR1P48060 266 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 SLC35E4Q6ICL7 350 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 VWA1Q6PCB0 445 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 SHISA5Q8N114 240 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 OR52M1Q8NGK5 317 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 LSM10Q969L4 123 aaKnown RBP12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 RSG1Q9BU20 258 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 TMPRSS5Q9H3S3 457 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 NLRC5Q86WI3 1866 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 FCN1O00602 326 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 CECR9P0C854 216 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 BCL2P10415 239 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 TMEM30BQ3MIR4 351 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 NPAS1Q99742 590 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 RASL11BQ9BPW5 248 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 DEPPQ9NTK1 212 aa12.15□□□□□ -0.46
PCDHGA11-201ENST00000398587 A0A0B4J293 547 aa12.15□□□□□ -0.47
PCDHGA11-201ENST00000398587 SMPD2O60906 423 aa12.15□□□□□ -0.47
PCDHGA11-201ENST00000398587 C1QL1O75973 258 aa12.15□□□□□ -0.47
PCDHGA11-201ENST00000398587 CCL1P22362 96 aa12.15□□□□□ -0.47
PCDHGA11-201ENST00000398587 ZP1P60852 638 aa12.15□□□□□ -0.47
PCDHGA11-201ENST00000398587 NHLRC3Q5JS37 347 aa12.15□□□□□ -0.47
PCDHGA11-201ENST00000398587 GRAMD2BQ96HH9 432 aa12.15□□□□□ -0.47
PCDHGA11-201ENST00000398587 PHOX2AO14813 284 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 S100A4P26447 101 aaKnown RBP12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 NSUN5P2Q63ZY6 315 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 GALNT14Q96FL9 552 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 IDI2-AS1Q9NZ38 188 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 INTS1Q8N201 2190 aaKnown RBP12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 ZNF716A6NP11 495 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 EFNA2O43921 213 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 SPINK4O60575 86 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 RPL27AP46776 148 aaKnown RBP12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 RPEL1Q2QD12 228 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 WDR73Q6P4I2 378 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 SPNS3Q6ZMD2 512 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 OR10D4PQ8NGN7 298 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 PERPQ96FX8 193 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 WDYHV1Q96HA8 205 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 RBKSQ9H477 322 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 A0A087WV48 116 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 GFRA3O60609 400 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 FABP4P15090 132 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 COX19Q49B96 90 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 TMUB1Q9BVT8 246 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 MDC1Q14676 2089 aaKnown RBP12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 FAM157CP0CG43 387 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 C10orf113Q5VZT2 155 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 DRAM1Q8N682 238 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 TAF15Q92804 592 aaKnown RBP eCLIP12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 COA4Q9NYJ1 87 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 RNF115Q9Y4L5 304 aa12.14□□□□□ -0.47
PCDHGA11-201ENST00000398587 AP4M1O00189 453 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 HIST1H3AP68431 136 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 Q8WTZ3 238 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 ASCL3Q9NQ33 180 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 FAM74A7A6NL05 159 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 MARCH11A6NNE9 402 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 PGA5P0DJD9 388 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 KRTDAPP60985 99 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 TNFRSF9Q07011 255 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms