RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 B4DEV8 164 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 SULT1A1P50225 295 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 CATR1Q13166 79 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 OR8G1Q15617 311 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 HIST3H3Q16695 136 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 BTNL3Q6UXE8 466 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 FAM58AQ8N1B3 248 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 CACNG5Q9UF02 275 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 DUSP13Q9UII6 198 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 PCDH15Q96QU1 1955 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF705GA8MUZ8 300 aaPredicted RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 ETV2O00321 342 aaPredicted RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 MMP9P14780 707 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 NTF4P34130 210 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 DLK1P80370 383 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 CST9LP1Q5W188 147 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 OR4C5Q8NGB2 326 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 RPUSD4Q96CM3 377 aaKnown RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 RNF125Q96EQ8 232 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 SMIM8Q96KF7 97 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 TECRQ9NZ01 308 aaKnown RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 PPIAL4AQ9Y536 164 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 H3BQ15 152 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 J3QT63 122 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 LYZL6O75951 148 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 IGHV3-13P01766 116 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 IGHV3-7P01780 117 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 PRRX1P54821 245 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 RND3P61587 244 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 C9orf152Q5JTZ5 239 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 FAM185AQ8N0U4 392 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 DEFB123Q8N688 67 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 FOXD3Q9UJU5 478 aaPredicted RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 HSPB8Q9UJY1 196 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 TGIF2-C20orf24A0A0A6YYL0 155 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 A0A1W2PRX2 142 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 CDIPTO14735 213 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 TCF21O43680 179 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 PDE6DO43924 150 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 SCGB1D1O95968 90 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 USF1P22415 310 aaPredicted RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 UBE2G2P60604 165 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF826PQ6ZT77 177 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 UBAC2Q8NBM4 344 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 DEFB108BQ8NET1 73 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 SLC25A40Q8TBP6 338 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 MRGPRDQ8TDS7 321 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 TVP23CQ96ET8 276 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 WSB1Q9Y6I7 421 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 WDR87Q6ZQQ6 2873 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 NDUFC2O95298 119 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 DTYMKP23919 212 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 G6PCP35575 357 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 HELZP42694 1942 aaKnown RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 ARL16Q0P5N6 197 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF573Q86YE8 665 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 KIAA1549Q9HCM3 1950 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 DLL3Q9NYJ7 618 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 TRBV6-7A0A0A0MS04 114 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 PPP5D1E7EU14 171 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 SYNGR2O43760 224 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 S100A8P05109 93 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 NUBP1P53384 320 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 RAB39BQ96DA2 213 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 FER1L6-AS2Q96M78 137 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 TMEM222Q9H0R3 208 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF552Q9H707 407 aaPredicted RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 TRGV11A0A075B6L2 103 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 TRGV5A0A0B4J1U4 118 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 SH2D1BO14796 132 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 CYB5BO43169 146 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 SELEP16581 610 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 LGALS4P56470 323 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 EDDM3BP56851 147 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 GNG3P63215 75 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 UBALD2Q8IYN6 164 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 COLQQ9Y215 455 aaPredicted RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 MUC4Q99102 2169 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 LRP5LA4QPB2 252 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 GAPDHP04406 335 aaKnown RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 METTL15P1P0C7V9 234 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 FGF12P61328 243 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 ERVS71-1P61550 626 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 SLC38A11Q08AI6 406 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 COL5A1-AS1Q5SY13 56 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 C1orf210Q8IVY1 113 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 MRPL30Q8TCC3 161 aaKnown RBP4.22□□□□□ -1.73
SMAD4-202ENST00000398417 SAMD10Q9BYL1 202 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 CFAP47Q6ZTR5 3102 aa4.22□□□□□ -1.73
SMAD4-202ENST00000398417 UBE2L5PA0A1B0GUS4 154 aa4.21□□□□□ -1.73
SMAD4-202ENST00000398417 A0A1W2PPE3 182 aa4.21□□□□□ -1.73
SMAD4-202ENST00000398417 FABP1P07148 127 aa4.21□□□□□ -1.73
SMAD4-202ENST00000398417 DCAF10Q5QP82 559 aa4.21□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF439Q8NDP4 499 aa4.21□□□□□ -1.73
SMAD4-202ENST00000398417 LHX4Q969G2 390 aa4.21□□□□□ -1.73
SMAD4-202ENST00000398417 PSG11Q9UQ72 335 aa4.21□□□□□ -1.73
SMAD4-202ENST00000398417 HIVEP3Q5T1R4 2406 aa4.21□□□□□ -1.73
SMAD4-202ENST00000398417 ZFP36L1Q07352 338 aaKnown RBP4.21□□□□□ -1.74
SMAD4-202ENST00000398417 LRFN3Q9BTN0 628 aa4.21□□□□□ -1.74
SMAD4-202ENST00000398417 SLC35B3Q9H1N7 401 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms