RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 CDKN3Q16667 212 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 ABHD17CQ6PCB6 329 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 SCCPDHQ8NBX0 429 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 BEX4Q9NWD9 120 aaPredicted RBP11.14□□□□□ -0.63
CCBE1-201ENST00000398179 TNFRSF18Q9Y5U5 241 aa11.14□□□□□ -0.63
CCBE1-201ENST00000398179 PARP4Q9UKK3 1724 aaKnown RBP11.14□□□□□ -0.63
CCBE1-201ENST00000398179 A0A1W2PQU0 124 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 POU3F1Q03052 451 aaPredicted RBP11.13□□□□□ -0.63
CCBE1-201ENST00000398179 SHISA2Q6UWI4 295 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 SHISA4Q96DD7 197 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 MPZP25189 248 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 CST5P28325 142 aaPredicted RBP11.13□□□□□ -0.63
CCBE1-201ENST00000398179 LDLRAD1Q5T700 205 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 TPRX1Q8N7U7 411 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 FOXA2Q9Y261 457 aaPredicted RBP11.13□□□□□ -0.63
CCBE1-201ENST00000398179 FMN2Q9NZ56 1722 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 A0A087WUJ7 227 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 SHISA8B8ZZ34 492 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 RUNX1Q01196 453 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 PRDX1Q06830 199 aaKnown RBP11.13□□□□□ -0.63
CCBE1-201ENST00000398179 P2RY6Q15077 328 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 C1orf220Q5T0J3 134 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 ZNF319Q9P2F9 582 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 ZNF324O75467 553 aaPredicted RBP11.13□□□□□ -0.63
CCBE1-201ENST00000398179 SLC22A24Q8N4F4 322 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 NUDT8Q8WV74 236 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 RTL8AQ9BWD3 113 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 DEFB126Q9BYW3 111 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 TMEM272A0A1B0GTI8 110 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 MPV17L2Q567V2 206 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 GPR146Q96CH1 333 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 GPR35Q9HC97 309 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 PRO0628Q9UI54 55 aa11.13□□□□□ -0.63
CCBE1-201ENST00000398179 MUC21A0A0G2JKD1 596 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 MUC21A0A140T8X8 626 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 MESP2Q0VG99 397 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 PHLDA2Q53GA4 152 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 MUC21Q5SSG8 566 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 SERTAD4-AS1Q5TG53 156 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 TMEM215Q68D42 235 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 VN1R2Q8NFZ6 395 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 FGF13Q92913 245 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 JPT1Q9UK76 154 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 A0A1W2PPC4 97 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 TMEM89A2RUT3 159 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 ACYP1P07311 99 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 IL36RNQ9UBH0 155 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 MYH6P13533 1939 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 TAX1BP3O14907 124 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 WNT2P09544 360 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 KCNMB1Q16558 191 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 ARHGEF39Q8N4T4 335 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 RTP3Q9BQQ7 232 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 TMEM242Q9NWH2 141 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 IFITM3Q01628 133 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 UBE2E2Q96LR5 201 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 PELI2Q9HAT8 420 aa11.12□□□□□ -0.63
CCBE1-201ENST00000398179 POLR3KQ9Y2Y1 108 aaPredicted RBP11.12□□□□□ -0.63
CCBE1-201ENST00000398179 CTLA4P16410 223 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 IRF7Q92985 503 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 IGHV4-39P01824 125 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 PSG4Q00888 419 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 C2orf82Q6UX34 121 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 MED1Q15648 1581 aaPredicted RBP11.11□□□□□ -0.63
CCBE1-201ENST00000398179 BCL9LQ86UU0 1499 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 PLA2G10O15496 165 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 BLVRBP30043 206 aaPredicted RBP11.11□□□□□ -0.63
CCBE1-201ENST00000398179 LY6G5CQ5SRR4 150 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 DRAM1Q8N682 238 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 THAP10Q9P2Z0 257 aaPredicted RBP11.11□□□□□ -0.63
CCBE1-201ENST00000398179 H3BTX0 84 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 YPEL1O60688 119 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 PITX3O75364 302 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 SAP30O75446 220 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 PAQR9Q6ZVX9 377 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 RIMKLAQ8IXN7 391 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 NEU3Q9UQ49 428 aa11.11□□□□□ -0.63
CCBE1-201ENST00000398179 SRSF10O75494 262 aaKnown RBP11.1□□□□□ -0.63
CCBE1-201ENST00000398179 B3GALT4O96024 378 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 APOBEC1P41238 236 aaKnown RBP11.1□□□□□ -0.63
CCBE1-201ENST00000398179 DEFB110Q30KQ9 67 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 MDP1Q86V88 176 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 ZNF740Q8NDX6 193 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 TMEM230Q96A57 120 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 TRMT61AQ96FX7 289 aaKnown RBP11.1□□□□□ -0.63
CCBE1-201ENST00000398179 MALP21145 153 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 MS4A18Q3C1V0 323 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 SLC23A3Q6PIS1 610 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 ZNF474Q6S9Z5 364 aaPredicted RBP11.1□□□□□ -0.63
CCBE1-201ENST00000398179 METTL26Q96S19 204 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 PXMP4Q9Y6I8 212 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 LDB3O75112 727 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 UPK3AO75631 287 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 FAM157CP0CG43 387 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 TMEM50BP56557 158 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 OR5C1Q8NGR4 320 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 JMJD8Q96S16 334 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 A0A1W2PPM0 123 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 IGLON5A6NGN9 336 aa11.1□□□□□ -0.63
CCBE1-201ENST00000398179 NPIPB15A6NHN6 443 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms