RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 VENTXO95231 258 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 TMEM11P17152 192 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 SLC35B1P78383 322 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 SAXO1Q8IYX7 474 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 OR2V2Q96R30 315 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 SPSB2Q99619 263 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 UQCR10Q9UDW1 63 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 SNRNP200O75643 2136 aaKnown RBP9.5□□□□□ -0.89
HPS4-202ENST00000398145 K7N7A8 449 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 LCN2P80188 198 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 SRSF4Q08170 494 aaKnown RBP9.5□□□□□ -0.89
HPS4-202ENST00000398145 ZADH2Q8N4Q0 377 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 FLVCR1-AS1Q8TAF5 88 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 CHRNA10Q9GZZ6 450 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 MRPL18Q9H0U6 180 aaKnown RBP9.5□□□□□ -0.89
HPS4-202ENST00000398145 SDF2L1Q9HCN8 221 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 C3orf80F5H4A9 247 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 BMPR1BO00238 502 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 SUPT4H1P63272 117 aaKnown RBP9.5□□□□□ -0.89
HPS4-202ENST00000398145 PDPNQ86YL7 162 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 TGIF2LYQ8IUE0 185 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 PLSCR2Q9NRY7 297 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 WIPI2Q9Y4P8 454 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 ZDBF2Q9HCK1 2354 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 TSC2P49815 1807 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 TRAV38-1A0A0B4J264 116 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 IGKV1-9A0A0C4DH69 117 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 EFEMP2O95967 443 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 OR8I2Q8N0Y5 310 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 PRNDQ9UKY0 176 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 MPDZO75970 2070 aa9.5□□□□□ -0.89
HPS4-202ENST00000398145 CSN3P07498 182 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 HIST1H1EP10412 219 aaKnown RBP9.49□□□□□ -0.89
HPS4-202ENST00000398145 ORM2P19652 201 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 CD82P27701 267 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 COL10A1Q03692 680 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 KCNMB1Q16558 191 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 LHFPL1Q86WI0 220 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 NHLRC2Q8NBF2 726 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 OR2D3Q8NGH3 330 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 ABHD14AQ9BUJ0 271 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 QTRT1Q9BXR0 403 aaKnown RBP9.49□□□□□ -0.89
HPS4-202ENST00000398145 MRPL13Q9BYD1 178 aaKnown RBP9.49□□□□□ -0.89
HPS4-202ENST00000398145 R4GN57 208 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 ISLRO14498 428 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 CELA2AP08217 269 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 ADCYAP1P18509 176 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 SPNS3Q6ZMD2 512 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 SLC25A40Q8TBP6 338 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 NDUFAF3Q9BU61 184 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 OR2J1Q9GZK6 312 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 BARX1Q9HBU1 254 aaPredicted RBP9.49□□□□□ -0.89
HPS4-202ENST00000398145 WASHC3Q9Y3C0 194 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 A0A1W2PN81 502 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 OR2H2O95918 312 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 HPRT1P00492 218 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 HBZP02008 142 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 ICAM4Q14773 271 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 HERPUD1Q15011 391 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 RSPO4Q2I0M5 234 aaPredicted RBP9.49□□□□□ -0.89
HPS4-202ENST00000398145 SPATA45Q537H7 98 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 PRDM14Q9GZV8 571 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 PPP1R14DQ9NXH3 145 aa9.49□□□□□ -0.89
HPS4-202ENST00000398145 GRIFINA4D1Z8 144 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 SMPD2O60906 423 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 TNFSF15O95150 251 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 TNFRSF1AP19438 455 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 MAGEA5P43359 124 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 PCP4P48539 62 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 LGALS4P56470 323 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 ZNF766Q5HY98 468 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 TMEM251Q8N6I4 163 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 MISP3Q96FF7 219 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 MAP1LC3CQ9BXW4 147 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 WNT5BQ9H1J7 359 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 WNT16Q9UBV4 365 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 TMEM210A6NLX4 147 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 K7ERU9 68 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 ARL16Q0P5N6 197 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 PMCHL1Q16048 86 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 TDHQ8IZJ6 230 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 OR52L2PQ8NGH6 319 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 OR4X1Q8NH49 305 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 VSTM2AQ8TAG5 236 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 RTN4RQ9BZR6 473 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 A0A0A6YYD4 124 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 hADV38S2A0JD32 116 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 ZG16O60844 167 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 P01737 135 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 EGR1P18146 543 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 CCL20P78556 96 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 C3AR1Q16581 482 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 FBXW9Q5XUX1 488 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 C1QL4Q86Z23 238 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 ZNF645Q8N7E2 425 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 NEURL1O76050 574 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 STARD6P59095 220 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 LRRC75BQ2VPJ9 315 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 MIC13Q5XKP0 118 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms