RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.93■□□□□ 0.14
PDLIM2-205ENST00000397761 hCG_1809904A0A1W2PP81 198 aa15.92■□□□□ 0.14
PDLIM2-205ENST00000397761 A0A1W2PPE2 198 aa15.92■□□□□ 0.14
PDLIM2-205ENST00000397761 A0A1W2PR64 198 aa15.92■□□□□ 0.14
PDLIM2-205ENST00000397761 A0A1W2PRV1 198 aa15.92■□□□□ 0.14
PDLIM2-205ENST00000397761 ENSAO43768 121 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-205ENST00000397761 Q8N7P7 452 aa15.92■□□□□ 0.14
PDLIM2-205ENST00000397761 HSD17B10Q99714 261 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-205ENST00000397761 GOSR2O14653 212 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 RAB29O14966 203 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 FOXH1O75593 365 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 CDS2O95674 445 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 GIPP09681 153 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 SLC25A16P16260 332 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 CLEC12BQ2HXU8 276 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 DCAF12L2Q5VW00 463 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 LGI3Q8N145 548 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 TCTEX1D1Q8N7M0 179 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 OR9G1Q8NH87 305 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 LHFPL5Q8TAF8 219 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 TNFRSF14Q92956 283 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 IL22RA2Q969J5 263 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 C18orf12Q96KH6 178 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 UNKLQ9H9P5 680 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 LIN7CQ9NUP9 197 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 PDZD2O15018 2839 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 SAA2-SAA4A0A096LPE2 208 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 IGHV2-70DA0A0C4DH43 119 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 A0A1W2PPE3 182 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 J3QR06 171 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 SAA2P0DJI9 122 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 GNG10P50151 68 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 ZNF137PP52743 207 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 C1orf229Q6ZS94 237 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 OR51H1Q8NH63 302 aa15.91■□□□□ 0.14
PDLIM2-205ENST00000397761 CR1P17927 2039 aa15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 A0A096LNT2 108 aa15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 FAM157AC9JC47 383 aa15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 DUTP33316 252 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 RAP2BP61225 183 aa15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 RPL30P62888 115 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 CATR1Q13166 79 aa15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 BTNL3Q6UXE8 466 aa15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 METTL8Q9H825 291 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 ONECUT1Q9UBC0 465 aa15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 KPTNQ9Y664 436 aa15.9■□□□□ 0.14
PDLIM2-205ENST00000397761 MYO9AB2RTY4 2548 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 IGHV2-26A0A0B4J1V2 119 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 DUXBA0A1W2PPF3 345 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 LINC00473A8K010 186 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 SIX6O95475 246 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 IGLV1-47P01700 117 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 PRTN3P24158 256 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 BRWD1-AS2P59051 145 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 LCN2P80188 198 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 ZNF585BQ52M93 769 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 RPL39P5Q59GN2 51 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 FAM71F2Q6NXP2 309 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 ZNF833PQ6ZTB9 187 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 LYG1Q8N1E2 194 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 ABHD12Q8N2K0 398 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 ST6GALNAC6Q969X2 333 aa15.89■□□□□ 0.13
PDLIM2-205ENST00000397761 CREBBPQ92793 2442 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 PIGBOS1A0A0B4J2F0 54 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 BOLA2-SMG1P6H3BVE0 249 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 ADAP1O75689 374 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 ARF6P62330 175 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 SELENOHQ8IZQ5 122 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 BEND2Q8NDZ0 799 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 DDB2Q92466 427 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 CLEC7AQ9BXN2 247 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 SIRPDQ9H106 197 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 MMP26Q9NRE1 261 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 ZNRD1Q9P1U0 126 aa15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 PRRC2AP48634 2157 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-205ENST00000397761 G3V3Q6 166 aa15.87■□□□□ 0.13
PDLIM2-205ENST00000397761 M0R1X1 148 aa15.87■□□□□ 0.13
PDLIM2-205ENST00000397761 CCSO14618 274 aa15.87■□□□□ 0.13
PDLIM2-205ENST00000397761 HNRNPCP07910 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
PDLIM2-205ENST00000397761 RPA2P15927 270 aa15.87■□□□□ 0.13
PDLIM2-205ENST00000397761 TMEM268Q5VZI3 342 aa15.87■□□□□ 0.13
PDLIM2-205ENST00000397761 PRSS57Q6UWY2 283 aa15.87■□□□□ 0.13
PDLIM2-205ENST00000397761 RBPMSQ93062 196 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-205ENST00000397761 C1orf159Q96HA4 380 aa15.87■□□□□ 0.13
PDLIM2-205ENST00000397761 S1PR3Q99500 378 aa15.87■□□□□ 0.13
PDLIM2-205ENST00000397761 RBFOX2O43251 390 aaKnown RBP eCLIP15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 C1QBP02746 253 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 SERPINE2P07093 398 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 USF1P22415 310 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 GGNBP1Q5YKI7 109 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 NCR3LG1Q68D85 454 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 HCP5Q6MZN7 132 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 GSG1LQ6UXU4 331 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 LYZL2Q7Z4W2 148 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 SLC35G3Q8N808 338 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 OR11H6Q8NGC7 330 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 TCTEX1D2Q8WW35 142 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 TMEM186Q96B77 213 aa15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 WDR89Q96FK6 387 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-205ENST00000397761 ADTRPQ96IZ2 230 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms