RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 OR9G1Q8NH87 305 aa13.8□□□□□ -0.2
TSPAN4-205ENST00000397406 TNFRSF14Q92956 283 aa13.8□□□□□ -0.2
TSPAN4-205ENST00000397406 CLEC7AQ9BXN2 247 aa13.8□□□□□ -0.2
TSPAN4-205ENST00000397406 GHITMQ9H3K2 345 aa13.8□□□□□ -0.2
TSPAN4-205ENST00000397406 SIRT7Q9NRC8 400 aa13.8□□□□□ -0.2
TSPAN4-205ENST00000397406 A0A0A6YYJ9 748 aa13.79□□□□□ -0.2
TSPAN4-205ENST00000397406 CRYM-AS1A6NIL9 109 aa13.79□□□□□ -0.2
TSPAN4-205ENST00000397406 PAX8Q06710 450 aa13.79□□□□□ -0.2
TSPAN4-205ENST00000397406 METTL11BQ5VVY1 283 aa13.79□□□□□ -0.2
TSPAN4-205ENST00000397406 ZBTB34Q8NCN2 500 aa13.79□□□□□ -0.2
TSPAN4-205ENST00000397406 OR52B4Q8NGK2 314 aa13.79□□□□□ -0.2
TSPAN4-205ENST00000397406 RTN4IP1Q8WWV3 396 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-205ENST00000397406 SDHAF2Q9NX18 166 aa13.79□□□□□ -0.2
TSPAN4-205ENST00000397406 GAB2Q9UQC2 676 aa13.79□□□□□ -0.2
TSPAN4-205ENST00000397406 hCG_2014768A0A024R1R8 64 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 SAA2-SAA4A0A096LPE2 208 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 PROP1O75360 226 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 PGLYRP1O75594 196 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 IGLV1-47P01700 117 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 SAA2P0DJI9 122 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 GPR12P47775 334 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 DHRS2Q13268 280 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 C4orf46Q504U0 113 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 C1orf229Q6ZS94 237 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 LYG2Q86SG7 212 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 CMTM1Q8IZ96 169 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 LINC01356Q8N9X3 169 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 CCDC71LQ8N9Z2 235 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 TBX15Q96SF7 602 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 GPHA2Q96T91 129 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 ZNF251Q9BRH9 671 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 NAA60Q9H7X0 242 aa13.78□□□□□ -0.2
TSPAN4-205ENST00000397406 TRAV20A0A0B4J274 112 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 C9orf170A2RU37 121 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 A8MV72 311 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 SNRPGP15A8MWD9 76 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 RAB29O14966 203 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 MPPED1O15442 326 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 TNFSF12O43508 249 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 TOX4O94842 621 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 SFT2D2O95562 160 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 ZNF16P17020 682 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 COX7A1P24310 79 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 KLRD1Q13241 179 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 ZNF626Q68DY1 528 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 TBC1D26Q86UD7 250 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 LYG1Q8N1E2 194 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 PNKDQ8N490 385 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 BEND2Q8NDZ0 799 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 OR11H6Q8NGC7 330 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 OR13D1Q8NGV5 346 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 MSI2Q96DH6 328 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 HEXA-AS1Q9H8Q6 139 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 PIPOXQ9P0Z9 390 aa13.77□□□□□ -0.21
TSPAN4-205ENST00000397406 TEX13DA0A0J9YY54 714 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 RNASEK-C17orf49H0YIS7 233 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 HLA-AP01891 365 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 VAMP1P23763 118 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 ZNF137PP52743 207 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 PRRX1P54821 245 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 CBX3Q13185 183 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 HLA-DRB5Q30154 266 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 RPL39P5Q59GN2 51 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 DCAF12L2Q5VW00 463 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 SGPP2Q8IWX5 399 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 CADM3Q8N126 398 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 ZNF431Q8TF32 576 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 TMEM186Q96B77 213 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 GALNT14Q96FL9 552 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 PCGF1Q9BSM1 259 aa13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 GPN1Q9HCN4 374 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-205ENST00000397406 ATRQ13535 2644 aa13.75□□□□□ -0.21
TSPAN4-205ENST00000397406 ODF3BA8MYP8 253 aa13.75□□□□□ -0.21
TSPAN4-205ENST00000397406 TOR1AO14656 332 aa13.75□□□□□ -0.21
TSPAN4-205ENST00000397406 S100GP29377 79 aa13.75□□□□□ -0.21
TSPAN4-205ENST00000397406 ZNF833PQ6ZTB9 187 aa13.75□□□□□ -0.21
TSPAN4-205ENST00000397406 OR10X1Q8NGY0 326 aa13.75□□□□□ -0.21
TSPAN4-205ENST00000397406 ST6GALNAC6Q969X2 333 aa13.75□□□□□ -0.21
TSPAN4-205ENST00000397406 OR51J1Q9H342 316 aa13.75□□□□□ -0.21
TSPAN4-205ENST00000397406 HIF1ANQ9NWT6 349 aa13.75□□□□□ -0.21
TSPAN4-205ENST00000397406 C3orf85A0A1B0GTC6 90 aa13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 CREBL2O60519 120 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 DUS4LO95620 317 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 GATA3P23771 443 aa13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 F2RP25116 425 aa13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 GZMKP49863 264 aa13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 RPL30P62888 115 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 SLC9A3R2Q15599 337 aa13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 NCR3LG1Q68D85 454 aa13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 KCTD9Q7L273 389 aa13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 OR4P4Q8NGL7 312 aa13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 TP53RKQ96S44 253 aa13.74□□□□□ -0.21
TSPAN4-205ENST00000397406 LINC00473A8K010 186 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 BUB1B-PAK6H3BSN5 160 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 M0R1X1 148 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 IFNA2P01563 188 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 OR5AC1P0C628 307 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 DUTP33316 252 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 BCAP31P51572 246 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms