RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 HOXA5P20719 270 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 CD69Q07108 199 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 GOLT1AQ6ZVE7 132 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 A0A0U1RQV5 110 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 ASPDHA6ND91 283 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 CELA2BP08218 269 aaPredicted RBP10.72□□□□□ -0.69
SMU1-201ENST00000397149 NPPCP23582 126 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 ATP6V0CP27449 155 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 ASCL4Q6XD76 172 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 GLMPQ8WWB7 406 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 UCN2Q96RP3 112 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 SSBP3Q9BWW4 388 aaPredicted RBP10.72□□□□□ -0.69
SMU1-201ENST00000397149 BCL2L10Q9HD36 194 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.72□□□□□ -0.69
SMU1-201ENST00000397149 MIC13Q5XKP0 118 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 SLC6A13Q9NSD5 602 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 CBLN4Q9NTU7 201 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 CISD1Q9NZ45 108 aaKnown RBP10.72□□□□□ -0.69
SMU1-201ENST00000397149 SCN3AQ9NY46 2000 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 A0A1B0GV90 55 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 PSCAO43653 123 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 CYB5R3P00387 301 aaPredicted RBP10.72□□□□□ -0.69
SMU1-201ENST00000397149 SLC25A15Q9Y619 301 aa10.72□□□□□ -0.69
SMU1-201ENST00000397149 A0A0B4J2E0 115 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 A0A1B0GX12 115 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 ZBTB42B2RXF5 422 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 CCL4P13236 92 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 OR10J3Q5JRS4 329 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 ASB10Q8WXI3 467 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 UQCR10Q9UDW1 63 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 SELENOKQ9Y6D0 94 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 H3BRM9 83 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 ZFP36L2P47974 494 aaKnown RBP10.71□□□□□ -0.69
SMU1-201ENST00000397149 LCN2P80188 198 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 FOXJ2Q9P0K8 574 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 ANKRD20A5PA0PJZ0 165 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 CBLN3Q6UW01 205 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 C17orf47Q8NEP4 570 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 SHISA4Q96DD7 197 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 SCGB3A1Q96QR1 104 aa10.71□□□□□ -0.69
SMU1-201ENST00000397149 PRR35P0CG20 571 aa10.71□□□□□ -0.7
SMU1-201ENST00000397149 TNFSF10P50591 281 aa10.71□□□□□ -0.7
SMU1-201ENST00000397149 SLC25A1P53007 311 aa10.71□□□□□ -0.7
SMU1-201ENST00000397149 SUMO4Q6EEV6 95 aa10.71□□□□□ -0.7
SMU1-201ENST00000397149 ZNF562Q6V9R5 426 aa10.71□□□□□ -0.7
SMU1-201ENST00000397149 OR2K2Q8NGT1 345 aa10.71□□□□□ -0.7
SMU1-201ENST00000397149 KLK2P20151 261 aa10.71□□□□□ -0.7
SMU1-201ENST00000397149 PSG9Q00887 426 aa10.71□□□□□ -0.7
SMU1-201ENST00000397149 S100A7L2Q5SY68 101 aa10.71□□□□□ -0.7
SMU1-201ENST00000397149 SLC17A5Q9NRA2 495 aa10.71□□□□□ -0.7
SMU1-201ENST00000397149 TSPAN7P41732 249 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 AICDAQ9GZX7 198 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 KCNE5Q9UJ90 142 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 SLIT3O75094 1523 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 ATP5LO75964 103 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 CRHP06850 196 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 TM4SF4P48230 202 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 TNFRSF12AQ9NP84 129 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 TRAV24A0A0B4J272 114 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 CLEC7AQ9BXN2 247 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 SRSF6Q13247 344 aaKnown RBP10.7□□□□□ -0.7
SMU1-201ENST00000397149 MESTQ5EB52 335 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 DEFB104AQ8WTQ1 72 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 C14orf144Q96I85 54 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 GPHA2Q96T91 129 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 RARRES2Q99969 163 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 TMEM250H0YL14 139 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 FOXA3P55318 350 aaPredicted RBP10.7□□□□□ -0.7
SMU1-201ENST00000397149 RSPO2Q6UXX9 243 aaPredicted RBP10.7□□□□□ -0.7
SMU1-201ENST00000397149 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 WFDC12Q8WWY7 111 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 TRGV3P03979 118 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 PAPPA-AS1Q5QFB9 102 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 OR4D11Q8NGI4 311 aa10.7□□□□□ -0.7
SMU1-201ENST00000397149 TMEFF2Q9UIK5 374 aaPredicted RBP10.7□□□□□ -0.7
SMU1-201ENST00000397149 INS-IGF2F8WCM5 200 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 INSP01308 110 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 TRA2AQ13595 282 aaKnown RBP eCLIP10.69□□□□□ -0.7
SMU1-201ENST00000397149 PMCHL1Q16048 86 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 C1QL3Q5VWW1 255 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 TMEM42Q69YG0 159 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 VKORC1L1Q8N0U8 176 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 DERL1Q9BUN8 251 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 TTC3P53804 2025 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 LILRA5A6NI73 299 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 HMGA1P17096 107 aaKnown RBP10.69□□□□□ -0.7
SMU1-201ENST00000397149 CRYBB3P26998 211 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 ZNF414Q96IQ9 312 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 KCNK17Q96T54 332 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 OR2H1Q9GZK4 316 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 SPCS1Q9Y6A9 102 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 PRB3Q04118 309 aaPredicted RBP10.69□□□□□ -0.7
SMU1-201ENST00000397149 ZNF600Q6ZNG1 722 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 TTC9CQ8N5M4 171 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 MON2Q7Z3U7 1717 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 SEC11BP0C7V7 166 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 MEF2BQ02080 365 aaPredicted RBP10.69□□□□□ -0.7
SMU1-201ENST00000397149 EEF1AKMT3Q96AZ1 226 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 SMIM6P0DI80 62 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms