RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 TRAV9-1A0A075B6T8 112 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 C11orf94C9JXX5 98 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 TRAPPC6AO75865 159 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 PDGFBP01127 241 aaPredicted RBP7.33□□□□□ -1.24
BDNF-204ENST00000395980 PLP2Q04941 152 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 TEX38Q6PEX7 206 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 NUFIP2Q7Z417 695 aaKnown RBP7.33□□□□□ -1.24
BDNF-204ENST00000395980 ZNF645Q8N7E2 425 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 TRAPPC2LQ9UL33 140 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 GDF1P27539 372 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 CDC34P49427 236 aaPredicted RBP7.32□□□□□ -1.24
BDNF-204ENST00000395980 CATR1Q13166 79 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 FAM78BQ5VT40 261 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 POLR3KQ9Y2Y1 108 aaPredicted RBP7.32□□□□□ -1.24
BDNF-204ENST00000395980 TRAPPC1Q9Y5R8 145 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 UNC80Q8N2C7 3258 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 RAB29O14966 203 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 NGFP01138 241 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 IGHV3-9P01782 118 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 TDGF1P3P51864 188 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 EIF4EBP1Q13541 118 aaPredicted RBP7.32□□□□□ -1.24
BDNF-204ENST00000395980 GATAD1Q8WUU5 269 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 SDK2Q58EX2 2172 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 A0A096LPE4 126 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 A0A1W2PPZ6 126 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 NPPCP23582 126 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 YPEL3P61236 119 aaPredicted RBP7.32□□□□□ -1.24
BDNF-204ENST00000395980 ERVK11-1P61568 191 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 DTD1Q8TEA8 209 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 GMPPAQ96IJ6 420 aaPredicted RBP7.32□□□□□ -1.24
BDNF-204ENST00000395980 POLDIP2Q9Y2S7 368 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 CNTRLQ7Z7A1 2325 aa7.32□□□□□ -1.24
BDNF-204ENST00000395980 ODAMA1E959 279 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 J3QW42 95 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 HMGB3O15347 200 aaKnown RBP7.31□□□□□ -1.24
BDNF-204ENST00000395980 OR2H2O95918 312 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 SCGB1D1O95968 90 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 CRYABP02511 175 aaKnown RBP7.31□□□□□ -1.24
BDNF-204ENST00000395980 CCL2P13500 99 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 RTL8AQ9BWD3 113 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 BOKQ9UMX3 212 aaPredicted RBP7.31□□□□□ -1.24
BDNF-204ENST00000395980 A0A0U1RQK1 487 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 A0A1W2PR80 420 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 ZNF320A2RRD8 509 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 CLDN14O95500 239 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 ESDP10768 282 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 SOX8P57073 446 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 SELENOTP62341 195 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 PAFAH1B2P68402 229 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 TFF3Q07654 80 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 ZNF146Q15072 292 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 DCAF10Q5QP82 559 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 MS4A10Q96PG2 267 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 C20orf144Q9BQM9 153 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 DEPPQ9NTK1 212 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 KCNIP1Q9NZI2 227 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 ZNF407Q9C0G0 2248 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 ZNF503-AS2A6NEH8 195 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 WISP2O76076 250 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 CHRNA7P36544 502 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 GNB1P62873 340 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 CLEC12BQ2HXU8 276 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 WDR31Q8NA23 367 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 IFI44Q8TCB0 444 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 ZCCHC14Q8WYQ9 949 aaKnown RBP7.31□□□□□ -1.24
BDNF-204ENST00000395980 ELOVL5Q9NYP7 299 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 WDR83OSQ9Y284 106 aa7.31□□□□□ -1.24
BDNF-204ENST00000395980 C1QTNF9BB2RNN3 333 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 RHBDL1O75783 438 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 RAC2P15153 192 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 MPLP40238 635 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 PPP1R32Q7Z5V6 425 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 TAAR6Q96RI8 345 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 CBLN4Q9NTU7 201 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 CLN8Q9UBY8 286 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 SIRPB1O00241 398 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 LILRA1O75019 489 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 MPDU1O75352 247 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 CYB561P49447 251 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 RANP62826 216 aaKnown RBP7.3□□□□□ -1.24
BDNF-204ENST00000395980 LYSMD4Q5XG99 296 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 APH1AQ96BI3 265 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 MDFIC2A0A1B0GVS7 189 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 K7ESF4 209 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 NTN3O00634 580 aaPredicted RBP7.3□□□□□ -1.24
BDNF-204ENST00000395980 SH2D1BO14796 132 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 GDF9O60383 454 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 WNT5AP41221 380 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 LHX2P50458 406 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 PMP22Q01453 160 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 GAGE1Q13065 139 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 SFRP2Q96HF1 295 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 TRAV39A0A0B4J263 110 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 TMEM30CPA0ZSE6 113 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 ZG16O60844 167 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 KRASP01116 189 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 G6PCP35575 357 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 TPPP2P59282 170 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 PRSS8Q16651 343 aa7.3□□□□□ -1.24
BDNF-204ENST00000395980 C9orf135Q5VTT2 229 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms