RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 KCNIP3Q9Y2W7 256 aa12.31□□□□□ -0.44
PTPN20-206ENST00000395722 CR1P17927 2039 aa12.31□□□□□ -0.44
PTPN20-206ENST00000395722 CSMD2Q7Z408 3487 aa12.31□□□□□ -0.44
PTPN20-206ENST00000395722 WNK2Q9Y3S1 2297 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 C3orf85A0A1B0GTC6 90 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 ODF3BA8MYP8 253 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 H0Y980 276 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 OR5AC1P0C628 307 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 SLC9A3R2Q15599 337 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 HLA-DRB5Q30154 266 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 ANKRD55Q3KP44 614 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 FAM71F2Q6NXP2 309 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 ZNF833PQ6ZTB9 187 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 LYG1Q8N1E2 194 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 GLYATL2Q8WU03 294 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 TP53RKQ96S44 253 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 HSD17B10Q99714 261 aaKnown RBP12.3□□□□□ -0.44
PTPN20-206ENST00000395722 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPN20-206ENST00000395722 CCDC168Q8NDH2 2452 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 TRAV20A0A0B4J274 112 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 DBX1A6NMT0 343 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 RNF212BA8MTL3 300 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 HOXB4P17483 251 aaPredicted RBP12.3□□□□□ -0.44
PTPN20-206ENST00000395722 COX7A1P24310 79 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 UCP1P25874 307 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 DUTP33316 252 aaKnown RBP12.3□□□□□ -0.44
PTPN20-206ENST00000395722 PRRX1P54821 245 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 RPL30P62888 115 aaKnown RBP12.3□□□□□ -0.44
PTPN20-206ENST00000395722 PNKDQ8N490 385 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 LINC01356Q8N9X3 169 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 WFDC11Q8NEX6 87 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 CASTOR1Q8WTX7 329 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 MSI2Q96DH6 328 aaKnown RBP12.3□□□□□ -0.44
PTPN20-206ENST00000395722 TMEM222Q9H0R3 208 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 MED28Q9H204 178 aa12.3□□□□□ -0.44
PTPN20-206ENST00000395722 ASH1LQ9NR48 2969 aaKnown RBP12.3□□□□□ -0.44
PTPN20-206ENST00000395722 CREBBPQ92793 2442 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 RNASEK-C17orf49H0YIS7 233 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 TOR1AO14656 332 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 SSNA1O43805 119 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 TOX4O94842 621 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 SULT1A3P0DMM9 295 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 SULT1A4P0DMN0 295 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 ANXA3P12429 323 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 PRB3Q04118 309 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-206ENST00000395722 FCN2Q15485 313 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 SP6Q3SY56 376 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 NCR3LG1Q68D85 454 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 LRTM2Q8N967 370 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 OR4P4Q8NGL7 312 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 PHB2Q99623 299 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 FAM212BQ9NTI7 297 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-206ENST00000395722 LINC00473A8K010 186 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 M0R1X1 148 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 LIAT1Q6ZQX7 453 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 TCTEX1D1Q8N7M0 179 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 OR10X1Q8NGY0 326 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 OR51H1Q8NH63 302 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 DDB2Q92466 427 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 TMEM186Q96B77 213 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 TMEM56Q96MV1 263 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 S1PR3Q99500 378 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 LIN7CQ9NUP9 197 aaKnown RBP12.29□□□□□ -0.44
PTPN20-206ENST00000395722 TMEM56-RWDD3S4R434 201 aa12.29□□□□□ -0.44
PTPN20-206ENST00000395722 LY6LH3BQJ8 138 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 IGHV4-31P0DP07 118 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 HLA-GP17693 338 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 GATA3P23771 443 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 BRWD1-AS2P59051 145 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 CATR1Q13166 79 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 KLRD1Q13241 179 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 TMEM249Q2WGJ8 235 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 OR11H7Q8NGC8 314 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 COQ8AQ8NI60 647 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 PRR13Q9NZ81 148 aa12.28□□□□□ -0.44
PTPN20-206ENST00000395722 BUB1B-PAK6H3BSN5 160 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 CDS2O95674 445 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 IL3RAP26951 378 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 SRPXP78539 464 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 C2orf68Q2NKX9 166 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 ZNF585BQ52M93 769 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 DCAF12L2Q5VW00 463 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 MAPK1IP1LQ8NDC0 245 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 LHFPL5Q8TAF8 219 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 ADTRPQ96IZ2 230 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 PCGF1Q9BSM1 259 aa12.27□□□□□ -0.44
PTPN20-206ENST00000395722 AMMECR1Q9Y4X0 333 aaPredicted RBP12.27□□□□□ -0.44
PTPN20-206ENST00000395722 CT45A6P0DMU7 189 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 CT45A5P0DMU8 189 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 CT45A7P0DMV0 189 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 CXCL3P19876 107 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 THBS3P49746 956 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 GZMKP49863 264 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 LINC00205P59089 165 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 LDLRAD2Q5SZI1 272 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 LIN54Q6MZP7 749 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 TCTEX1D2Q8WW35 142 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 IL22RA2Q969J5 263 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 C18orf12Q96KH6 178 aa12.27□□□□□ -0.45
PTPN20-206ENST00000395722 NEURL2Q9BR09 285 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms