RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SVOPQ8N4V2 548 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 NKAIN3Q8N8D7 197 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 ZNF485Q8NCK3 441 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 ZNF555Q8NEP9 628 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 OR5T1Q8NG75 326 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 SETD6Q8TBK2 473 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 TMEM80Q96HE8 168 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 RNF5Q99942 180 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 UQCC2Q9BRT2 126 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 CHMP1AQ9HD42 196 aaPredicted RBP16.12■□□□□ 0.17
TRAF4-203ENST00000394925 GHRLQ9UBU3 117 aa16.12■□□□□ 0.17
TRAF4-203ENST00000394925 NKX1-2Q9UD57 310 aaPredicted RBP16.12■□□□□ 0.17
TRAF4-203ENST00000394925 MED21Q13503 144 aa16.11■□□□□ 0.17
TRAF4-203ENST00000394925 FXYD3Q14802 87 aa16.11■□□□□ 0.17
TRAF4-203ENST00000394925 IL34Q6ZMJ4 242 aa16.11■□□□□ 0.17
TRAF4-203ENST00000394925 POC5Q8NA72 575 aa16.11■□□□□ 0.17
TRAF4-203ENST00000394925 DRAXINQ8NBI3 349 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-203ENST00000394925 OR9G4Q8NGQ1 327 aa16.11■□□□□ 0.17
TRAF4-203ENST00000394925 CPEP16870 476 aa16.1■□□□□ 0.17
TRAF4-203ENST00000394925 SYNJ2BPP57105 145 aa16.1■□□□□ 0.17
TRAF4-203ENST00000394925 RPS16P62249 146 aaKnown RBP16.1■□□□□ 0.17
TRAF4-203ENST00000394925 ZNF880Q6PDB4 577 aa16.1■□□□□ 0.17
TRAF4-203ENST00000394925 GTSCR1Q86UQ5 136 aa16.1■□□□□ 0.17
TRAF4-203ENST00000394925 TSNAXQ99598 290 aaKnown RBP16.1■□□□□ 0.17
TRAF4-203ENST00000394925 AGMATQ9BSE5 352 aa16.1■□□□□ 0.17
TRAF4-203ENST00000394925 RETNQ9HD89 108 aa16.1■□□□□ 0.17
TRAF4-203ENST00000394925 A0A0G2JLM5 398 aa16.09■□□□□ 0.17
TRAF4-203ENST00000394925 DYNC1I1O14576 645 aa16.09■□□□□ 0.17
TRAF4-203ENST00000394925 NAPSAO96009 420 aa16.09■□□□□ 0.17
TRAF4-203ENST00000394925 IGKV1-16P04430 117 aa16.09■□□□□ 0.17
TRAF4-203ENST00000394925 HTR2CP28335 458 aa16.09■□□□□ 0.17
TRAF4-203ENST00000394925 LINC00205P59089 165 aa16.09■□□□□ 0.17
TRAF4-203ENST00000394925 C11orf54Q9H0W9 315 aaPredicted RBP16.09■□□□□ 0.17
TRAF4-203ENST00000394925 OR1A1Q9P1Q5 309 aa16.09■□□□□ 0.17
TRAF4-203ENST00000394925 H3BUA1 57 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 ITGB1BP1O14713 200 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 SLC25A17O43808 307 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 PROP1O75360 226 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 SPDEFO95238 335 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 CNIH1O95406 144 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 UBBP0CG47 229 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 CELP19835 753 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 CEACAM6P40199 344 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 TAS2R43P59537 309 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 RPS27AP62979 156 aaKnown RBP16.08■□□□□ 0.16
TRAF4-203ENST00000394925 MOGAT2Q3SYC2 334 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 NICN1Q9BSH3 213 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 THAP7Q9BT49 309 aaPredicted RBP16.08■□□□□ 0.16
TRAF4-203ENST00000394925 TMEM59Q9BXS4 323 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 SMPD3Q9NY59 655 aaPredicted RBP16.08■□□□□ 0.16
TRAF4-203ENST00000394925 ADAM30Q9UKF2 790 aa16.08■□□□□ 0.16
TRAF4-203ENST00000394925 DEFA5Q01523 94 aa16.07■□□□□ 0.16
TRAF4-203ENST00000394925 LCN12Q6JVE5 192 aa16.07■□□□□ 0.16
TRAF4-203ENST00000394925 MOB1BQ7L9L4 216 aa16.07■□□□□ 0.16
TRAF4-203ENST00000394925 ZNF383Q8NA42 475 aa16.07■□□□□ 0.16
TRAF4-203ENST00000394925 EDARADDQ8WWZ3 215 aa16.07■□□□□ 0.16
TRAF4-203ENST00000394925 FAM110AQ9BQ89 295 aa16.07■□□□□ 0.16
TRAF4-203ENST00000394925 KCNK15Q9H427 330 aa16.07■□□□□ 0.16
TRAF4-203ENST00000394925 FAM53CQ9NYF3 392 aa16.07■□□□□ 0.16
TRAF4-203ENST00000394925 ALMS1Q8TCU4 4167 aa16.06■□□□□ 0.16
TRAF4-203ENST00000394925 IZUMO1RA6ND01 250 aa16.06■□□□□ 0.16
TRAF4-203ENST00000394925 CSN3P07498 182 aa16.06■□□□□ 0.16
TRAF4-203ENST00000394925 ZBTB25P24278 435 aa16.06■□□□□ 0.16
TRAF4-203ENST00000394925 ST3GAL4Q11206 333 aa16.06■□□□□ 0.16
TRAF4-203ENST00000394925 PQLC1Q8N2U9 271 aa16.06■□□□□ 0.16
TRAF4-203ENST00000394925 IL17DQ8TAD2 202 aa16.06■□□□□ 0.16
TRAF4-203ENST00000394925 GGHQ92820 318 aa16.06■□□□□ 0.16
TRAF4-203ENST00000394925 S100A14Q9HCY8 104 aa16.06■□□□□ 0.16
TRAF4-203ENST00000394925 PLEKHJ1Q9NW61 149 aa16.06■□□□□ 0.16
TRAF4-203ENST00000394925 PEF1Q9UBV8 284 aaKnown RBP16.06■□□□□ 0.16
TRAF4-203ENST00000394925 TRBV12-3P01733 135 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 MAPK3P27361 379 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-203ENST00000394925 SSBP2P81877 361 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-203ENST00000394925 PJVKQ0ZLH3 352 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 INSL4Q14641 139 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 TATDN3Q17R31 274 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 PDPNQ86YL7 162 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 C10orf67Q8IYJ2 551 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 Q8N402 240 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 HDHD3Q9BSH5 251 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-203ENST00000394925 TM2D1Q9BX74 207 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 HIPK2Q9H2X6 1198 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 ZNF221Q9UK13 617 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 CEPT1Q9Y6K0 416 aa16.05■□□□□ 0.16
TRAF4-203ENST00000394925 APOA2P02652 100 aa16.04■□□□□ 0.16
TRAF4-203ENST00000394925 CD1AP06126 327 aa16.04■□□□□ 0.16
TRAF4-203ENST00000394925 HLA-DRB3P79483 266 aa16.04■□□□□ 0.16
TRAF4-203ENST00000394925 UNC119Q13432 240 aa16.04■□□□□ 0.16
TRAF4-203ENST00000394925 KCNG3Q8TAE7 436 aa16.04■□□□□ 0.16
TRAF4-203ENST00000394925 THRSPQ92748 146 aa16.04■□□□□ 0.16
TRAF4-203ENST00000394925 PLEKHA3Q9HB20 300 aa16.04■□□□□ 0.16
TRAF4-203ENST00000394925 AK3Q9UIJ7 227 aa16.04■□□□□ 0.16
TRAF4-203ENST00000394925 SHISA3A0PJX4 238 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 EFCAB10A6NFE3 127 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 SCTP09683 121 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 AADACP22760 399 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 RPEL1Q2QD12 228 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 C1orf100Q5SVJ3 147 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 GLT8D1Q68CQ7 371 aa16.03■□□□□ 0.16
TRAF4-203ENST00000394925 ZNF343Q6P1L6 599 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms