RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 H3BQ15 152 aa12.79□□□□□ -0.36
CPSF7-202ENST00000394888 IFNL4K9M1U5 179 aa12.79□□□□□ -0.36
CPSF7-202ENST00000394888 HSPB1P04792 205 aaKnown RBP12.79□□□□□ -0.36
CPSF7-202ENST00000394888 TCF15Q12870 199 aa12.79□□□□□ -0.36
CPSF7-202ENST00000394888 MRPL49Q13405 166 aaKnown RBP12.79□□□□□ -0.36
CPSF7-202ENST00000394888 RAB39BQ96DA2 213 aa12.79□□□□□ -0.36
CPSF7-202ENST00000394888 C1orf159Q96HA4 380 aa12.79□□□□□ -0.36
CPSF7-202ENST00000394888 SRRM5B3KS81 715 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 UBE2CO00762 179 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 FCN3O75636 299 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 TSPAN9O75954 239 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 ACSM6Q6P461 480 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 DUX4L9Q6RFH8 374 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-202ENST00000394888 MEGF10Q96KG7 1140 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 LURAP1Q96LR2 239 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 LRRC30A6NM36 301 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 ZNF727A8MUV8 499 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 FABP6P51161 128 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 DEFB109BQ30KR1 87 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 RPP25LQ8N5L8 163 aaKnown RBP12.78□□□□□ -0.36
CPSF7-202ENST00000394888 OR10G4Q8NGN3 311 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 TMEM170AQ8WVE7 144 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 UFSP2Q9NUQ7 469 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 MLXQ9UH92 298 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 FAM90A26D6RGX4 464 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 PRSS46E5RG02 174 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 PTAFRP25105 342 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 CFHR2P36980 270 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 OR2B11Q5JQS5 317 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 GALMQ96C23 342 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 KCNS2Q9ULS6 477 aa12.78□□□□□ -0.36
CPSF7-202ENST00000394888 TACC2O95359 2948 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 IGHV3-43A0A0B4J1X8 118 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 BTBD17A6NE02 478 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 AHRRA9YTQ3 701 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 MT-ND4LP03901 98 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 CXCL1P09341 107 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 IGHV3-43DP0DP04 118 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 RAB5AP20339 215 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 COL8A2P25067 703 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 ERVFRD-1P60508 538 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 FAM24BQ8N5W8 94 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 SFT2D1Q8WV19 159 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 ZNF665Q9H7R5 613 aa12.77□□□□□ -0.36
CPSF7-202ENST00000394888 IFITM10A6NMD0 228 aa12.77□□□□□ -0.37
CPSF7-202ENST00000394888 BHLHA15Q7RTS1 189 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-202ENST00000394888 SEBOXQ9HB31 216 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-202ENST00000394888 SVEP1Q4LDE5 3571 aa12.77□□□□□ -0.37
CPSF7-202ENST00000394888 EP300Q09472 2414 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF98A6NK75 572 aa12.77□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF816Q0VGE8 651 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF808Q8N4W9 903 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-202ENST00000394888 MRPL37Q9BZE1 423 aaKnown RBP12.77□□□□□ -0.37
CPSF7-202ENST00000394888 CLN8Q9UBY8 286 aa12.77□□□□□ -0.37
CPSF7-202ENST00000394888 CACNA1DQ01668 2161 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 CCKARP32238 428 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 KRBOX4Q5JUW0 171 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF343Q6P1L6 599 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 TGIF2LYQ8IUE0 185 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 RBMXL3Q8N7X1 1067 aaKnown RBP12.76□□□□□ -0.37
CPSF7-202ENST00000394888 ZBTB34Q8NCN2 500 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 DDB2Q92466 427 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 DYSFO75923 2080 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 OR9G9P0C7N8 305 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 RPL23AP62750 156 aaKnown RBP12.76□□□□□ -0.37
CPSF7-202ENST00000394888 HTD2P86397 168 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 ELOBQ15370 118 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 AKIRIN2Q53H80 203 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 NCR3LG1Q68D85 454 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 PBDC1Q9BVG4 233 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 HRNRQ86YZ3 2850 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-202ENST00000394888 CADP27708 2225 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 IGLV3-9A0A075B6K5 115 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 ST8SIA5O15466 376 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 ZG16O60844 167 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 TUBG1P23258 451 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 PMS2P11Q13670 270 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 RBMS3Q6XE24 437 aaKnown RBP12.76□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF561Q8N587 486 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 TUBG2Q9NRH3 451 aa12.76□□□□□ -0.37
CPSF7-202ENST00000394888 A0A087WWC5 75 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 DFFBO76075 338 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF16P17020 682 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-202ENST00000394888 SNRPEP62304 92 aaKnown RBP12.75□□□□□ -0.37
CPSF7-202ENST00000394888 PDLIM3Q53GG5 364 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-202ENST00000394888 STX12Q86Y82 276 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 Q8WTZ3 238 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 TAF15Q92804 592 aaKnown RBP eCLIP12.75□□□□□ -0.37
CPSF7-202ENST00000394888 S100PBPQ96BU1 408 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 SARAFQ96BY9 339 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 SLC31A2O15432 143 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 TIMM8AO60220 97 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-202ENST00000394888 IGHV3-13P01766 116 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 SELLP14151 372 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 FGF8P55075 233 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-202ENST00000394888 Q6ZS92 163 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 C1QL4Q86Z23 238 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 BCL2L14Q9BZR8 327 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 IFI27L2Q9H2X8 130 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 C15orf62A8K5M9 175 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms