RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 BRS3P32247 399 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 PTGER4P35408 488 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 UBE2V1Q13404 147 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 KRTCAP3Q53RY4 240 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 ZNF506Q5JVG8 444 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 SAMD13Q5VXD3 122 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 UNQ5815/PRO19632Q6UWF5 114 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 GBGT1Q8N5D6 347 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 TMEM54Q969K7 222 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 RSPO3Q9BXY4 272 aaPredicted RBP4.9□□□□□ -1.63
RFFL-202ENST00000394597 MEGF9Q9H1U4 602 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 ZNF703Q9H7S9 590 aaPredicted RBP4.9□□□□□ -1.63
RFFL-202ENST00000394597 TMEM106BQ9NUM4 274 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 PSENENQ9NZ42 101 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 DOCK11Q5JSL3 2073 aa4.9□□□□□ -1.63
RFFL-202ENST00000394597 UBE2L5PA0A1B0GUS4 154 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 SNURFLB1AK76 121 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TNFSF13O75888 250 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 CCL2P13500 99 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 IER3P46695 156 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 SPATA46Q5T0L3 261 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TMEM211Q6ICI0 200 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 LIAT1Q6ZQX7 453 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 WFDC8Q8IUA0 241 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 OSR2Q8N2R0 312 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 OR10P1Q8NGE3 313 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TRAPPC2LQ9UL33 140 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 ACACAQ13085 2346 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TECTAO75443 2155 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 RALGAPA1Q6GYQ0 2036 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 LOC102723971A0A1B0GUV8 181 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 HSPB6O14558 160 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 GNG7O60262 68 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 ZNF205O95201 554 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 RAC2P15153 192 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 PTGDSP41222 190 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 PSG4Q00888 419 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 GABRA6Q16445 453 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 AARDQ4LEZ3 155 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 VAX1Q5SQQ9 334 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 C10orf128Q5T292 105 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 FDX2Q6P4F2 183 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 RNASEKQ6P5S7 137 aaKnown RBP4.89□□□□□ -1.63
RFFL-202ENST00000394597 OR52L2PQ8NGH6 319 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 OR10S1Q8NGN2 331 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 AQP3Q92482 292 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 GFI1Q99684 422 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TIMP4Q99727 224 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 ST3GAL6Q9Y274 331 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 LHFPL6Q9Y693 200 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 PLXND1Q9Y4D7 1925 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 COL4A3Q01955 1670 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TRBV24-1A0A075B6N3 115 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TRBV5-7A0A0A0MS05 114 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 SPRY1O43609 319 aaPredicted RBP4.89□□□□□ -1.63
RFFL-202ENST00000394597 EFNA2O43921 213 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 CDC14BO60729 498 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 ISG15P05161 165 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 SRP14P37108 136 aaKnown RBP4.89□□□□□ -1.63
RFFL-202ENST00000394597 CCL20P78556 96 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 MEF2BQ02080 365 aaPredicted RBP4.89□□□□□ -1.63
RFFL-202ENST00000394597 Q0VFX4 171 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 FAM214BQ7L5A3 538 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 BATF2Q8N1L9 274 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 OR10G8Q8NGN5 311 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 OR13G1Q8NGZ3 307 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 RNASE8Q8TDE3 154 aaKnown RBP4.89□□□□□ -1.63
RFFL-202ENST00000394597 MRGPRDQ8TDS7 321 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TMEM170AQ8WVE7 144 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 WDR61Q9GZS3 305 aaKnown RBP4.89□□□□□ -1.63
RFFL-202ENST00000394597 GSX1Q9H4S2 264 aaPredicted RBP4.89□□□□□ -1.63
RFFL-202ENST00000394597 HSPB7Q9UBY9 170 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 ATP23Q9Y6H3 246 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TRBV6-7A0A0A0MS04 114 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 ATXN7O15265 892 aaPredicted RBP4.89□□□□□ -1.63
RFFL-202ENST00000394597 CHST1O43916 411 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 NEURL1O76050 574 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 CELA3AP09093 270 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 OR3A4PP47883 348 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 GNG3P63215 75 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 PRDX4Q13162 271 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 RAB31Q13636 194 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 INO80CQ6PI98 192 aaPredicted RBP4.89□□□□□ -1.63
RFFL-202ENST00000394597 C6orf201Q7Z4U5 140 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TGIF2LYQ8IUE0 185 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TMEM252Q8N6L7 170 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 PTX4Q96A99 478 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 KLHDC3Q9BQ90 382 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 WNT10AQ9GZT5 417 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 DEPPQ9NTK1 212 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 KIF26BQ2KJY2 2108 aa4.89□□□□□ -1.63
RFFL-202ENST00000394597 TTC28Q96AY4 2481 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 NOTCH2Q04721 2471 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 A0A0U1RQV5 110 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 A0A1B0GU03 582 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 C10orf142B7Z368 130 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 M0R2Z0 102 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 BMPR1BO00238 502 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 HS3ST1O14792 307 aa4.88□□□□□ -1.63
RFFL-202ENST00000394597 SH2D1BO14796 132 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms