RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 HELZ2Q9BYK8 2649 aaKnown RBP16.63■□□□□ 0.25
HDDC3-202ENST00000394272 SAA2-SAA4A0A096LPE2 208 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 A0A1W2PPH5 198 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 RAB29O14966 203 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 RBP4P02753 201 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 SAA2P0DJI9 122 aaPredicted RBP16.63■□□□□ 0.25
HDDC3-202ENST00000394272 PAX1P15863 534 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 ZNF16P17020 682 aaPredicted RBP16.63■□□□□ 0.25
HDDC3-202ENST00000394272 BRWD1-AS2P59051 145 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 FGL1Q08830 312 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 IAH1Q2TAA2 248 aaPredicted RBP16.63■□□□□ 0.25
HDDC3-202ENST00000394272 ESCO2Q56NI9 601 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 RPL39P5Q59GN2 51 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 C8orf31Q8N9H6 132 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 GRPEL2Q8TAA5 225 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 ZNF596Q8TC21 504 aa16.63■□□□□ 0.25
HDDC3-202ENST00000394272 IGKV1-39P01597 117 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 IGKV1D-39P04432 117 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 VDAC1P21796 283 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 ATP5J2P56134 94 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 LINC00205P59089 165 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 NMSQ5H8A3 153 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 LYG1Q8N1E2 194 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 C9orf62Q8N4C0 152 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 BARX1Q9HBU1 254 aaPredicted RBP16.62■□□□□ 0.25
HDDC3-202ENST00000394272 FAM212BQ9NTI7 297 aaPredicted RBP16.62■□□□□ 0.25
HDDC3-202ENST00000394272 COMMD9Q9P000 198 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 PTPN13Q12923 2485 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 CELSR2Q9HCU4 2923 aa16.62■□□□□ 0.25
HDDC3-202ENST00000394272 NBPF19A0A087WUL8 3843 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 PIGBOS1A0A0B4J2F0 54 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 LIPFP07098 398 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 LRRC37A5PQ49AS3 106 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 LINC00311Q8N616 119 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 TCTEX1D1Q8N7M0 179 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 TCTEX1D2Q8WW35 142 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 ZNRD1Q9P1U0 126 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 SESN1Q9Y6P5 492 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 MED13LQ71F56 2210 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 KIAA1324LA8MWY0 1029 aaPredicted RBP16.61■□□□□ 0.25
HDDC3-202ENST00000394272 M0R1X1 148 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 RAMP3O60896 148 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 MPC2O95563 127 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 RPA2P15927 270 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 BOLA1Q9Y3E2 137 aa16.61■□□□□ 0.25
HDDC3-202ENST00000394272 LOC105371242A0A075B767 164 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 HMSDA8MTL9 139 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 PSMB6P28072 239 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 LMO4P61968 165 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 NCR3LG1Q68D85 454 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 ZNF787Q6DD87 383 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 C11orf87Q6NUJ2 197 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 SPAG16Q8N0X2 631 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 ZBTB8BQ8NAP8 495 aaPredicted RBP16.6■□□□□ 0.25
HDDC3-202ENST00000394272 CLDND2Q8NHS1 167 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 TMEM133Q9H2Q1 129 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 PLSCR3Q9NRY6 295 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 GSKIPQ9P0R6 139 aa16.6■□□□□ 0.25
HDDC3-202ENST00000394272 CSMD2Q7Z408 3487 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 CENPEQ02224 2701 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 J3QR06 171 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 NDUFS8O00217 210 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 SLC25A4P12235 298 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 C10orf105Q8TEF2 133 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 FAM168AQ92567 244 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 GSX2Q9BZM3 304 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 ZFP36P26651 326 aaKnown RBP16.59■□□□□ 0.25
HDDC3-202ENST00000394272 LGALSLQ3ZCW2 172 aaPredicted RBP16.59■□□□□ 0.25
HDDC3-202ENST00000394272 OR2B11Q5JQS5 317 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 OR9G1Q8NH87 305 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 DDB2Q92466 427 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 PSMG3-AS1Q96PY0 264 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 PIMREGQ9BSJ6 248 aa16.59■□□□□ 0.25
HDDC3-202ENST00000394272 FXYD6-FXYD2A0A087WZ82 144 aa16.58■□□□□ 0.24
HDDC3-202ENST00000394272 A8MXK9 166 aa16.58■□□□□ 0.24
HDDC3-202ENST00000394272 VWC2LB2RUY7 222 aa16.58■□□□□ 0.24
HDDC3-202ENST00000394272 LPAR6P43657 344 aa16.58■□□□□ 0.24
HDDC3-202ENST00000394272 RAB32Q13637 225 aa16.58■□□□□ 0.24
HDDC3-202ENST00000394272 ZNF833PQ6ZTB9 187 aa16.58■□□□□ 0.24
HDDC3-202ENST00000394272 ABHD12Q8N2K0 398 aa16.58■□□□□ 0.24
HDDC3-202ENST00000394272 LSM10Q969L4 123 aaKnown RBP16.58■□□□□ 0.24
HDDC3-202ENST00000394272 HSPB11Q9Y547 144 aa16.58■□□□□ 0.24
HDDC3-202ENST00000394272 A0A0G2JRQ6 117 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 H0YIZ8 118 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 IGKV1-5P01602 117 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 SSTR2P30874 369 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 TMEM65Q6PI78 240 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 CLEC2AQ6UVW9 174 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 Q8N7P7 452 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 OR4D5Q8NGN0 318 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 CD300LFQ8TDQ1 290 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 PERPQ96FX8 193 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 S1PR3Q99500 378 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 SPIN2AQ99865 258 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 SPIN2BQ9BPZ2 258 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 RNF126Q9BV68 326 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 ONECUT1Q9UBC0 465 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 WNK2Q9Y3S1 2297 aa16.57■□□□□ 0.24
HDDC3-202ENST00000394272 hCG_1809904A0A1W2PP81 198 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 A0A1W2PPE2 198 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms