RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 OVOL2Q9BRP0 275 aa11.77□□□□□ -0.52
USP49-203ENST00000394253 MS4A7Q9GZW8 240 aaPredicted RBP11.77□□□□□ -0.52
USP49-203ENST00000394253 GFRA1P56159 465 aa11.77□□□□□ -0.52
USP49-203ENST00000394253 SNRPD3P62318 126 aaKnown RBP11.77□□□□□ -0.52
USP49-203ENST00000394253 PXMP4Q9Y6I8 212 aa11.77□□□□□ -0.52
USP49-203ENST00000394253 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 TIMP1P01033 207 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 EMDP50402 254 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 TUBD1Q9UJT1 453 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 LAMTOR1Q6IAA8 161 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 BIVMQ86UB2 503 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 KCNS1Q96KK3 526 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 SPANXCQ9NY87 97 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 ATP6V0CP27449 155 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 SCD5Q86SK9 330 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 ABHD1Q96SE0 405 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 PRSS27Q9BQR3 290 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 ZBP1Q9H171 429 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 PGPEP1LA6NFU8 196 aa11.77□□□□□ -0.53
USP49-203ENST00000394253 HOXD3P31249 432 aaPredicted RBP11.77□□□□□ -0.53
USP49-203ENST00000394253 SSC5DA1L4H1 1573 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 ZNF688P0C7X2 276 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 RGP1Q92546 391 aaPredicted RBP11.76□□□□□ -0.53
USP49-203ENST00000394253 A0A0U1RQS6 177 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 A0A1B0GW15 77 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 WTIPA6NIX2 430 aaPredicted RBP11.76□□□□□ -0.53
USP49-203ENST00000394253 A8MWV9 139 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 ID4P47928 161 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 ZNF83P51522 516 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 CX3CL1P78423 397 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 TIMM23BQ5SRD1 257 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 XAF1Q6GPH4 301 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 TBL2Q9Y4P3 447 aaKnown RBP11.76□□□□□ -0.53
USP49-203ENST00000394253 KCNE3Q9Y6H6 103 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 SNAI1O95863 264 aaPredicted RBP11.76□□□□□ -0.53
USP49-203ENST00000394253 SLC23A3Q6PIS1 610 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 GLRX2Q9NS18 164 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 TRAV12-3A0A0B4J271 114 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 TMPRSS3P57727 454 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 ECSCRQ19T08 205 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 SLC25A37Q9NYZ2 338 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 CISD1Q9NZ45 108 aaKnown RBP11.76□□□□□ -0.53
USP49-203ENST00000394253 ZNF257Q9Y2Q1 563 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 TRBV20OR9-2A0A075B6H5 130 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 GJB3O75712 270 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 ARL14EPLP0DKL9 152 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 RIPPLY3P57055 190 aa11.76□□□□□ -0.53
USP49-203ENST00000394253 K7N7A8 449 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 IGHV4-39P01824 125 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 ZGLP1P0C6A0 271 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 DPTQ07507 201 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 IL36RNQ9UBH0 155 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 TRGV8A0A0C4DH27 118 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 NUBP1P53384 320 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 C1orf220Q5T0J3 134 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 ORAI1Q96D31 301 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 TRAV8-1A0A0A6YYK1 113 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 ATXN8Q156A1 80 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 OR4X2Q8NGF9 303 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 RAX2Q96IS3 184 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 SYT11Q9BT88 431 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 A0A0B4J2E0 115 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 A0A1B0GX12 115 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 LINC00869P0C866 280 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 MALP21145 153 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.75□□□□□ -0.53
USP49-203ENST00000394253 CICQ96RK0 1608 aaPredicted RBP11.75□□□□□ -0.53
USP49-203ENST00000394253 OTOGLQ3ZCN5 2332 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 PTGESO14684 152 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 C12orf73Q69YU5 71 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 NXT2Q9NPJ8 142 aaKnown RBP11.75□□□□□ -0.53
USP49-203ENST00000394253 FSCN3Q9NQT6 498 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 SIGLEC7Q9Y286 467 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 ACSF3Q4G176 576 aaPredicted RBP11.75□□□□□ -0.53
USP49-203ENST00000394253 LDLRAD2Q5SZI1 272 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 MMP25Q9NPA2 562 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 TMEM179BQ7Z7N9 219 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 C1orf174Q8IYL3 243 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 NCOR1P1Q9H4R4 102 aa11.75□□□□□ -0.53
USP49-203ENST00000394253 CXCL13O43927 109 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 FGF17O60258 216 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 ZNF250P15622 560 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 GAGE13Q4V321 117 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 NT5CQ8TCD5 201 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 IGHV3-43A0A0B4J1X8 118 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 IGHV3-43DP0DP04 118 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 CD27P26842 260 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 RPS27P42677 84 aaKnown RBP11.74□□□□□ -0.53
USP49-203ENST00000394253 ZNF117Q03924 483 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 SPSB4Q96A44 273 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 TMEM30AQ9NV96 361 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 TRGV5A0A0B4J1U4 118 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 PCMT1P22061 227 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 GVQW1Q8N7I0 195 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 POC1AQ8NBT0 407 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 PSMB11A5LHX3 300 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 FBLN7Q53RD9 439 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 OR11H7Q8NGC8 314 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 CD300LDQ6UXZ3 194 aa11.74□□□□□ -0.53
USP49-203ENST00000394253 HEXA-AS1Q9H8Q6 139 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms