RNA–Protein interactions for RNA: ENST00000393606.7

UBTF-203, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 2,683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-203ENST00000393606 TPRX1Q8N7U7 411 aa16.38■□□□□ 0.21
UBTF-203ENST00000393606 NANOS1Q8WY41 292 aaKnown RBP16.38■□□□□ 0.21
UBTF-203ENST00000393606 FAM210BQ96KR6 192 aa16.38■□□□□ 0.21
UBTF-203ENST00000393606 RTL8AQ9BWD3 113 aa16.38■□□□□ 0.21
UBTF-203ENST00000393606 OBP2BQ9NPH6 170 aa16.38■□□□□ 0.21
UBTF-203ENST00000393606 SIRT7Q9NRC8 400 aa16.38■□□□□ 0.21
UBTF-203ENST00000393606 SMG1Q96Q15 3661 aaKnown RBP16.38■□□□□ 0.21
UBTF-203ENST00000393606 ZNF705GA8MUZ8 300 aaPredicted RBP16.37■□□□□ 0.21
UBTF-203ENST00000393606 SMPD2O60906 423 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 MBP02144 154 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 PAX1P15863 534 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 ZNF25P17030 456 aaPredicted RBP16.37■□□□□ 0.21
UBTF-203ENST00000393606 MPV17P39210 176 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 ARL16Q0P5N6 197 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 ZNF726P1Q15940 193 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 ZNF808Q8N4W9 903 aaPredicted RBP16.37■□□□□ 0.21
UBTF-203ENST00000393606 DUXBA0A1W2PPF3 345 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 PTBP3O95758 552 aaKnown RBP16.37■□□□□ 0.21
UBTF-203ENST00000393606 PGA5P0DJD9 388 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 MMP9P14780 707 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 MAP1BP46821 2468 aaKnown RBP16.37■□□□□ 0.21
UBTF-203ENST00000393606 CHD3Q12873 2000 aaKnown RBP16.37■□□□□ 0.21
UBTF-203ENST00000393606 ZNF787Q6DD87 383 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 RP1L1Q8IWN7 2480 aaPredicted RBP16.37■□□□□ 0.21
UBTF-203ENST00000393606 DOCK11Q5JSL3 2073 aa16.37■□□□□ 0.21
UBTF-203ENST00000393606 SMCO3A2RU48 225 aa16.36■□□□□ 0.21
UBTF-203ENST00000393606 KIAA1324LA8MWY0 1029 aaPredicted RBP16.36■□□□□ 0.21
UBTF-203ENST00000393606 ZNF880Q6PDB4 577 aa16.36■□□□□ 0.21
UBTF-203ENST00000393606 RIMS4Q9H426 269 aaPredicted RBP16.36■□□□□ 0.21
UBTF-203ENST00000393606 MKRN2OSH3BPM6 223 aa16.36■□□□□ 0.21
UBTF-203ENST00000393606 DFFBO76075 338 aa16.36■□□□□ 0.21
UBTF-203ENST00000393606 GZMBP10144 247 aa16.36■□□□□ 0.21
UBTF-203ENST00000393606 PSG7Q13046 419 aa16.36■□□□□ 0.21
UBTF-203ENST00000393606 SRSF7Q16629 238 aaKnown RBP eCLIP16.36■□□□□ 0.21
UBTF-203ENST00000393606 PLPPR2Q96GM1 343 aa16.36■□□□□ 0.21
UBTF-203ENST00000393606 NDUFAF3Q9BU61 184 aa16.36■□□□□ 0.21
UBTF-203ENST00000393606 GP6Q9HCN6 339 aa16.36■□□□□ 0.21
UBTF-203ENST00000393606 MGAQ8IWI9 3026 aa16.35■□□□□ 0.21
UBTF-203ENST00000393606 IGKV1-5P01602 117 aa16.35■□□□□ 0.21
UBTF-203ENST00000393606 LINC00205P59089 165 aa16.35■□□□□ 0.21
UBTF-203ENST00000393606 SNHG12Q9BXW3 62 aa16.35■□□□□ 0.21
UBTF-203ENST00000393606 PSPNO60542 156 aa16.35■□□□□ 0.21
UBTF-203ENST00000393606 BCL2P10415 239 aa16.35■□□□□ 0.21
UBTF-203ENST00000393606 AESQ08117 197 aa16.35■□□□□ 0.21
UBTF-203ENST00000393606 PLA2G2CQ5R387 149 aa16.35■□□□□ 0.21
UBTF-203ENST00000393606 OR1L1Q8NH94 360 aa16.35■□□□□ 0.21
UBTF-203ENST00000393606 SPANXN5Q5MJ07 72 aa16.34■□□□□ 0.21
UBTF-203ENST00000393606 SCGB1C1Q8TD33 95 aa16.34■□□□□ 0.21
UBTF-203ENST00000393606 PKIBQ9C010 78 aa16.34■□□□□ 0.21
UBTF-203ENST00000393606 FABP6P51161 128 aa16.34■□□□□ 0.21
UBTF-203ENST00000393606 LTC4SQ16873 150 aa16.34■□□□□ 0.21
UBTF-203ENST00000393606 BTNL3Q6UXE8 466 aa16.34■□□□□ 0.21
UBTF-203ENST00000393606 C1orf87Q8N0U7 546 aa16.34■□□□□ 0.21
UBTF-203ENST00000393606 MSL2Q9HCI7 577 aa16.34■□□□□ 0.21
UBTF-203ENST00000393606 PSENENQ9NZ42 101 aa16.34■□□□□ 0.21
UBTF-203ENST00000393606 USF3Q68DE3 2245 aa16.34■□□□□ 0.21
UBTF-203ENST00000393606 ICE1Q9Y2F5 2266 aa16.33■□□□□ 0.21
UBTF-203ENST00000393606 A6NNC1 897 aa16.33■□□□□ 0.21
UBTF-203ENST00000393606 ELLP55199 621 aaPredicted RBP16.33■□□□□ 0.21
UBTF-203ENST00000393606 ZNF816Q0VGE8 651 aaPredicted RBP16.33■□□□□ 0.21
UBTF-203ENST00000393606 LBHQ53QV2 105 aaPredicted RBP16.33■□□□□ 0.21
UBTF-203ENST00000393606 PRAMEF6Q5VXH4 476 aa16.33■□□□□ 0.21
UBTF-203ENST00000393606 DPPA3Q6W0C5 159 aa16.33■□□□□ 0.21
UBTF-203ENST00000393606 ZNF497Q6ZNH5 498 aa16.33■□□□□ 0.21
UBTF-203ENST00000393606 OR52L2PQ8NGH6 319 aa16.33■□□□□ 0.21
UBTF-203ENST00000393606 PPP1R14DQ9NXH3 145 aa16.33■□□□□ 0.21
UBTF-203ENST00000393606 IGHV3-43A0A0B4J1X8 118 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 A0A1B0GU03 582 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 RAMP3O60896 148 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 IGHV3-43DP0DP04 118 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 OR3A1P47881 315 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 RAB4BP61018 213 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 ZNF585BQ52M93 769 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 OR8G2PQ6IF36 304 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 VWA1Q6PCB0 445 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 LINC00596Q86U02 117 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 HAPLN4Q86UW8 402 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 LRP11Q86VZ4 500 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 DRAM1Q8N682 238 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 IL22RA2Q969J5 263 aa16.33■□□□□ 0.2
UBTF-203ENST00000393606 CISD1Q9NZ45 108 aaKnown RBP16.33■□□□□ 0.2
UBTF-203ENST00000393606 ELOA3CA0A087WX78 387 aaPredicted RBP16.32■□□□□ 0.2
UBTF-203ENST00000393606 TRAV1-1A0A0B4J248 108 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 LRP5LA4QPB2 252 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 MARCH11A6NNE9 402 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 CEBPZOSA8MTT3 80 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 DEFB108AA8MXU0 73 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 IFNL4K9M1U5 179 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 KRASP01116 189 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 SPINK9Q5DT21 86 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 FDCSPQ8NFU4 85 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 RFESDQ8TAC1 157 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 RCC1LQ96I51 464 aaKnown RBP16.32■□□□□ 0.2
UBTF-203ENST00000393606 HEATR1Q9H583 2144 aaKnown RBP16.32■□□□□ 0.2
UBTF-203ENST00000393606 CLDN34H7C241 214 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 SH2D1BO14796 132 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 SYNGR2O43760 224 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 CD55P08174 381 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 NPSP0C0P6 89 aa16.32■□□□□ 0.2
UBTF-203ENST00000393606 MRPL49Q13405 166 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms