RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 ZNF616Q08AN1 781 aa14.13□□□□□ -0.15
PDLIM7-205ENST00000393551 ECSCRQ19T08 205 aa14.13□□□□□ -0.15
PDLIM7-205ENST00000393551 ZNF660Q6AZW8 331 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-205ENST00000393551 DRAXINQ8NBI3 349 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-205ENST00000393551 PTX4Q96A99 478 aa14.13□□□□□ -0.15
PDLIM7-205ENST00000393551 URM1Q9BTM9 101 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-205ENST00000393551 PLGRKTQ9HBL7 147 aa14.13□□□□□ -0.15
PDLIM7-205ENST00000393551 TPSG1Q9NRR2 321 aa14.13□□□□□ -0.15
PDLIM7-205ENST00000393551 RNF150Q9ULK6 438 aa14.13□□□□□ -0.15
PDLIM7-205ENST00000393551 TPRKBQ9Y3C4 175 aa14.13□□□□□ -0.15
PDLIM7-205ENST00000393551 CRHBPP24387 322 aa14.12□□□□□ -0.15
PDLIM7-205ENST00000393551 MAP2K4P45985 399 aa14.12□□□□□ -0.15
PDLIM7-205ENST00000393551 MLLT11Q13015 90 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-205ENST00000393551 DCTN2Q13561 401 aaKnown RBP14.12□□□□□ -0.15
PDLIM7-205ENST00000393551 DCUN1D4Q92564 292 aa14.12□□□□□ -0.15
PDLIM7-205ENST00000393551 WWC2-AS2Q96NR7 200 aa14.12□□□□□ -0.15
PDLIM7-205ENST00000393551 PECRQ9BY49 303 aa14.12□□□□□ -0.15
PDLIM7-205ENST00000393551 ISYNA1Q9NPH2 558 aa14.12□□□□□ -0.15
PDLIM7-205ENST00000393551 KCNK7Q9Y2U2 307 aa14.12□□□□□ -0.15
PDLIM7-205ENST00000393551 WASHC3Q9Y3C0 194 aa14.12□□□□□ -0.15
PDLIM7-205ENST00000393551 A0A1W2PN81 502 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 RGS10O43665 173 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 IGKV1-16P04430 117 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 OR8U8P0C7N1 319 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 ZBTB25P24278 435 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 MC5RP33032 325 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 CHRNA7P36544 502 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 RAB11BQ15907 218 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 C2orf76Q3KRA6 126 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 ZNF383Q8NA42 475 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 FAM3DQ96BQ1 224 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 FAM103A1Q9BTL3 118 aaKnown RBP14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 TOLLIPQ9H0E2 274 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 VCX3BQ9H321 246 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 GHITMQ9H3K2 345 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 C12orf4Q9NQ89 552 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 A3GALT2U3KPV4 340 aa14.11□□□□□ -0.15
PDLIM7-205ENST00000393551 SHISA3A0PJX4 238 aa14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 H7C2Y5 167 aa14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 ARL6IP5O75915 188 aa14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 CALRP27797 417 aaKnown RBP14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 PSG5Q15238 335 aa14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 TRAM1Q15629 374 aa14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 MOGAT2Q3SYC2 334 aa14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 CD200R1LQ6Q8B3 271 aa14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 PRSS48Q7RTY5 328 aa14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 DLX4Q92988 240 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 MGLLQ99685 303 aa14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 FOXA2Q9Y261 457 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 ZNF256Q9Y2P7 627 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-205ENST00000393551 TMEM272A0A1B0GTI8 110 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 HSPA12AO43301 675 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 RBBP9O75884 186 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 GSTP1P09211 210 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 SLURP1P55000 103 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 SSBP2P81877 361 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 SSX1Q16384 188 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 EDARADDQ8WWZ3 215 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 CLCC1Q96S66 551 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 RNF5Q99942 180 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 CMSS1Q9BQ75 279 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 CCDC90BQ9GZT6 254 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 RDH8Q9NYR8 311 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 METTL1Q9UBP6 276 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 V9GY05 133 aa14.09□□□□□ -0.15
PDLIM7-205ENST00000393551 IGHV4OR15-8A0A075B7B6 117 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 A0A087WW49 117 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 CD3GP09693 182 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 NHLRC4P0CG21 123 aaPredicted RBP14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 PSMA1P25786 263 aaKnown RBP14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 INSL3P51460 131 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 PLGLAQ15195 96 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 HES5Q5TA89 166 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 ZNF562Q6V9R5 426 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 PPP1R27Q86WC6 154 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 TCTEX1D1Q8N7M0 179 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 LFNGQ8NES3 379 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 ASCL2Q99929 193 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 MGAT4AQ9UM21 535 aa14.08□□□□□ -0.16
PDLIM7-205ENST00000393551 TNCP24821 2201 aa14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 DYNC2H1Q8NCM8 4307 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 TRDCB7Z8K6 153 aa14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 OVOL1O14753 267 aa14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 ARPC1BO15143 372 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 DENRO43583 198 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 CA2P00918 260 aa14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 LGALS1P09382 135 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 OR10A3P58181 314 aa14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 AKIRIN2Q53H80 203 aa14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 UNQ5815/PRO19632Q6UWF5 114 aa14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 OR56B1Q8NGI3 324 aa14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 C5orf30Q96GV9 206 aa14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 U3KQK5 164 aa14.07□□□□□ -0.16
PDLIM7-205ENST00000393551 LINC01619G3V211 115 aa14.06□□□□□ -0.16
PDLIM7-205ENST00000393551 IGLV2-23P01705 113 aa14.06□□□□□ -0.16
PDLIM7-205ENST00000393551 IGHV3-11P01762 117 aa14.06□□□□□ -0.16
PDLIM7-205ENST00000393551 ACTBL2Q562R1 376 aa14.06□□□□□ -0.16
PDLIM7-205ENST00000393551 IGSF11Q5DX21 431 aa14.06□□□□□ -0.16
PDLIM7-205ENST00000393551 ZNF429Q86V71 674 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 207.1 ms