RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 GFOD1Q9NXC2 390 aa11.13□□□□□ -0.63
PTN-202ENST00000393083 MIOXQ9UGB7 285 aa11.13□□□□□ -0.63
PTN-202ENST00000393083 RNF150Q9ULK6 438 aa11.13□□□□□ -0.63
PTN-202ENST00000393083 PSG11Q9UQ72 335 aa11.13□□□□□ -0.63
PTN-202ENST00000393083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTN-202ENST00000393083 C13orf42A0A1B0GVH6 325 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 H0Y980 276 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 TGFAP01135 160 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 MSMBP08118 114 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 CCL3L1P16619 93 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 NFYBP25208 207 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 ZFP36P26651 326 aaKnown RBP11.12□□□□□ -0.63
PTN-202ENST00000393083 SRPXP78539 464 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 SRSF4Q08170 494 aaKnown RBP11.12□□□□□ -0.63
PTN-202ENST00000393083 MSMO1Q15800 293 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 TMEM200BQ69YZ2 307 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 LGI3Q8N145 548 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 ZBTB34Q8NCN2 500 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 OR51H1Q8NH63 302 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 GLYATL2Q8WU03 294 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 FAM216AQ8WUB2 273 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 NEIL1Q96FI4 390 aaPredicted RBP11.12□□□□□ -0.63
PTN-202ENST00000393083 SEC22AQ96IW7 307 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 HYLS1Q96M11 299 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 TMEM222Q9H0R3 208 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 LINC00574Q9H8X3 128 aa11.12□□□□□ -0.63
PTN-202ENST00000393083 TRBV23-1A0A0A0MS06 115 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 KIAA1324LA8MWY0 1029 aaPredicted RBP11.11□□□□□ -0.63
PTN-202ENST00000393083 F2RP25116 425 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 Q5BKY6 102 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 ZNF841Q6ZN19 808 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 LRTM2Q8N967 370 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 LHFPL5Q8TAF8 219 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 LEAP2Q969E1 77 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 C5orf30Q96GV9 206 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 ABHD14BQ96IU4 210 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 LPAR2Q9HBW0 351 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 YAE1D1Q9NRH1 226 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 LIN7CQ9NUP9 197 aaKnown RBP11.11□□□□□ -0.63
PTN-202ENST00000393083 MALRD1Q5VYJ5 2156 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 SVEP1Q4LDE5 3571 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 RNF212BA8MTL3 300 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 MPTX1A8MV57 137 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 A8MXK9 166 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 MMP23AO75900 390 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 IFNA21P01568 189 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 IGHV3-7P01780 117 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 UCP1P25874 307 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 GPR12P47775 334 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 DVL1P1P54792 670 aaPredicted RBP11.11□□□□□ -0.63
PTN-202ENST00000393083 Q3ZCU0 254 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 TMEM268Q5VZI3 342 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 GGNBP1Q5YKI7 109 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 OR11H4Q8NGC9 324 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 OR10A7Q8NGE5 316 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 OR52M1Q8NGK5 317 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 GRPEL2Q8TAA5 225 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 TMEM186Q96B77 213 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 ABHD14AQ9BUJ0 271 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 COMMD9Q9P000 198 aa11.11□□□□□ -0.63
PTN-202ENST00000393083 RPUSD1Q9UJJ7 312 aaKnown RBP11.11□□□□□ -0.63
PTN-202ENST00000393083 POLR3KQ9Y2Y1 108 aaPredicted RBP11.11□□□□□ -0.63
PTN-202ENST00000393083 HIVEP2P31629 2446 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 ITGB1BP1O14713 200 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 SLC31A2O15432 143 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 FOXH1O75593 365 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 B3GALNT1O75752 331 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 GNG10P50151 68 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 RAB7AP51149 207 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 LCN2P80188 198 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 UTF1Q5T230 341 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 BTNL3Q6UXE8 466 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 ZNF695Q8IW36 515 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 SLC35G3Q8N808 338 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 OR10C1Q96KK4 312 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 NMES1Q9C002 83 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 IFI27L2Q9H2X8 130 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 HIF1ANQ9NWT6 349 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 SDHAF2Q9NX18 166 aa11.1□□□□□ -0.63
PTN-202ENST00000393083 FN1P02751 2386 aaKnown RBP11.1□□□□□ -0.63
PTN-202ENST00000393083 NSD1Q96L73 2696 aaPredicted RBP11.09□□□□□ -0.63
PTN-202ENST00000393083 TRAV14DV4A0A0A6YYC5 116 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 TRAV20A0A0B4J274 112 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 INAFM1C9JVW0 142 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 GPR37O15354 613 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 DLX6P56179 175 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 CYCSP99999 105 aaKnown RBP11.09□□□□□ -0.63
PTN-202ENST00000393083 CATR1Q13166 79 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 EIF4EBP1Q13541 118 aaPredicted RBP11.09□□□□□ -0.63
PTN-202ENST00000393083 LRRC37A5PQ49AS3 106 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 ESCO2Q56NI9 601 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 WDR25Q64LD2 544 aaPredicted RBP11.09□□□□□ -0.63
PTN-202ENST00000393083 HEPN1Q6WQI6 88 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 LYZL2Q7Z4W2 148 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 SELENOHQ8IZQ5 122 aaKnown RBP11.09□□□□□ -0.63
PTN-202ENST00000393083 ZNF439Q8NDP4 499 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 PPP1R1CQ8WVI7 109 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 C2orf50Q96LR7 162 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 TMEM56Q96MV1 263 aa11.09□□□□□ -0.63
PTN-202ENST00000393083 AGMATQ9BSE5 352 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms