RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 LOXL3P58215 753 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 RPL23AP62750 156 aaKnown RBP16.65■□□□□ 0.26
PTPN11-202ENST00000392597 TLE1Q04724 770 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 MST1LQ2TV78 715 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 CD300LFQ8TDQ1 290 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 TCTEX1D2Q8WW35 142 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 LGALS8O00214 317 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 ST8SIA5O15466 376 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 P0C879 139 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 TMEM30BQ3MIR4 351 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 DMRTC2Q8IXT2 367 aaPredicted RBP16.65■□□□□ 0.26
PTPN11-202ENST00000392597 C1orf87Q8N0U7 546 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 SPAG16Q8N0X2 631 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 RNASE6Q93091 150 aaKnown RBP16.65■□□□□ 0.26
PTPN11-202ENST00000392597 PARP11Q9NR21 331 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 TANC2Q9HCD6 1990 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 TRGV10A0A0A0MS01 117 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 DEFB108AA8MXU0 73 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 TOR1AO14656 332 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 SYNGR2O43760 224 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 RAMP3O60896 148 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 MED6O75586 246 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 GPR12P47775 334 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 TAS2R30P59541 319 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 IZUMO4Q1ZYL8 232 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 PXDC1Q5TGL8 231 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 LINC00574Q9H8X3 128 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 SAP30LQ9HAJ7 183 aa16.64■□□□□ 0.25
PTPN11-202ENST00000392597 RAI1Q7Z5J4 1906 aaPredicted RBP16.63■□□□□ 0.25
PTPN11-202ENST00000392597 TRAV38-1A0A0B4J264 116 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 KBTBD11-OT1A0A1B0GTJ5 212 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 NKX6-3A6NJ46 265 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 SELLP14151 372 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 RAB5CP51148 216 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 SWI5Q1ZZU3 235 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 C17orf58Q2M2W7 97 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 Q3ZCU0 254 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 STX12Q86Y82 276 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 ODF3L1Q8IXM7 274 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 CORO2AQ92828 525 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 PLPPR2Q96GM1 343 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 CLN8Q9UBY8 286 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 NDRG3Q9UGV2 375 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 GAB2Q9UQC2 676 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 MEX3AA1L020 520 aaKnown RBP16.63■□□□□ 0.25
PTPN11-202ENST00000392597 C17orf98A8MV24 154 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 E7EQL1 145 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 CCL21O00585 134 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 CLDN14O95500 239 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 GYPAP02724 150 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 CD3EP07766 207 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 RAB7AP51149 207 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 BRWD1-AS2P59051 145 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 EFNB3Q15768 340 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 TUSC1Q2TAM9 212 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 BTNL3Q6UXE8 466 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 ZNF295-AS1Q8N0V1 137 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 DEFB108BQ8NET1 73 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 CCL13Q99616 98 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 PLA2G2EQ9NZK7 142 aa16.63■□□□□ 0.25
PTPN11-202ENST00000392597 ROS1P08922 2347 aa16.62■□□□□ 0.25
PTPN11-202ENST00000392597 TXNL1O43396 289 aa16.62■□□□□ 0.25
PTPN11-202ENST00000392597 NXPH3O95157 252 aa16.62■□□□□ 0.25
PTPN11-202ENST00000392597 DANCRP0C864 163 aa16.62■□□□□ 0.25
PTPN11-202ENST00000392597 PJVKQ0ZLH3 352 aa16.62■□□□□ 0.25
PTPN11-202ENST00000392597 LTC4SQ16873 150 aa16.62■□□□□ 0.25
PTPN11-202ENST00000392597 OR5C1Q8NGR4 320 aa16.62■□□□□ 0.25
PTPN11-202ENST00000392597 GFOD1Q9NXC2 390 aa16.62■□□□□ 0.25
PTPN11-202ENST00000392597 COQ3Q9NZJ6 369 aa16.62■□□□□ 0.25
PTPN11-202ENST00000392597 ZNF729A6NN14 1252 aaPredicted RBP16.61■□□□□ 0.25
PTPN11-202ENST00000392597 LINC00473A8K010 186 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 S1PR2O95136 353 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 OMGP23515 440 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 SULT1A1P50225 295 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 F2RL1P55085 397 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 MS4A5Q9H3V2 200 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 TMEM178BH3BS89 294 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 RAB29O14966 203 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 CRYZL1O95825 349 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 APOBEC3AP31941 199 aaPredicted RBP16.61■□□□□ 0.25
PTPN11-202ENST00000392597 DUTP33316 252 aaKnown RBP16.61■□□□□ 0.25
PTPN11-202ENST00000392597 DYNLT3P51808 116 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 ZNF816Q0VGE8 651 aaPredicted RBP16.61■□□□□ 0.25
PTPN11-202ENST00000392597 CLINT1Q14677 625 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 DUX4L9Q6RFH8 374 aaPredicted RBP16.61■□□□□ 0.25
PTPN11-202ENST00000392597 BTNL8Q6UX41 500 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 TGIF2LYQ8IUE0 185 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 FAM216BQ8N7L0 139 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.61■□□□□ 0.25
PTPN11-202ENST00000392597 BPIFCQ8NFQ6 507 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 LYPD6BQ8NI32 183 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 LRRC46Q96FV0 321 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 IFI27L2Q9H2X8 130 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 NARFLQ9H6Q4 476 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 DCAF16Q9NXF7 216 aa16.61■□□□□ 0.25
PTPN11-202ENST00000392597 STRAPQ9Y3F4 350 aaKnown RBP16.61■□□□□ 0.25
PTPN11-202ENST00000392597 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.6■□□□□ 0.25
PTPN11-202ENST00000392597 RBFOX2O43251 390 aaKnown RBP eCLIP16.6■□□□□ 0.253e-6■■■■□ 22.3
PTPN11-202ENST00000392597 DFFBO76075 338 aa16.6■□□□□ 0.25
PTPN11-202ENST00000392597 CST7O76096 145 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms