RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 NATD1Q8N6N6 113 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 OR51T1Q8NGJ9 327 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 OR13C8Q8NGS7 320 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 OR13C9Q8NGT0 318 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 FAM45AQ8TCE6 357 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 PATE1Q8WXA2 126 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 PGLYRP3Q96LB9 341 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 HINT2Q9BX68 163 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 REG4Q9BYZ8 158 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 NIT2Q9NQR4 276 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 SLC2A9Q9NRM0 540 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 OR5AC2Q9NZP5 309 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 COMMD9Q9P000 198 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 LINC00527Q9UJ94 153 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 RHBDD3Q9Y3P4 386 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 SNX10Q9Y5X0 201 aa0.03□□□□□ -2.4
SNORD28B-201ENST00000390993 SCN9AQ15858 1988 aa0.03□□□□□ -2.41
SNORD28B-201ENST00000390993 ADAMTSL3P82987 1691 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 BRWD1Q9NSI6 2320 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 NAV2Q8IVL1 2488 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 TRBV6-7A0A0A0MS04 114 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 TRAV14DV4A0A0A6YYC5 116 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 IGHV1-18A0A0C4DH31 117 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 A0A1W2PPM0 123 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 H7C2G1 150 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 K7EN84 100 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 M0QYV0 167 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 PHYHO14832 338 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 GSTZ1O43708 216 aaPredicted RBP0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 STAG3L3P0CL85 134 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 OR13C7P0DN81 318 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 CCL3P10147 92 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 BGNP21810 368 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 CALRP27797 417 aaKnown RBP0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 CCR2P41597 374 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 GABRA2P47869 451 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 CLDN8P56748 225 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 TAS2R20P59543 309 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 TPI1P60174 286 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 AKR1C1Q04828 323 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 ACTL10Q5JWF8 245 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 TMEM31Q5JXX7 168 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 C10orf55Q5SWW7 151 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 TEX36Q5VZQ5 186 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 FAHD1Q6P587 224 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 DOLPP1Q86YN1 238 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 UMODL1-AS1Q8N2C9 162 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 C15orf53Q8NAA6 179 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 OR51L1Q8NGJ5 315 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 OR4C6Q8NH72 309 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 CLDND2Q8NHS1 167 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 SMCR5Q8TEV8 140 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 KIAA1143Q96AT1 154 aaPredicted RBP0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 PPWD1Q96BP3 646 aaKnown RBP0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 MRAP2Q96G30 205 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 SMR3AQ99954 134 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 CHRNA10Q9GZZ6 450 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 MED28Q9H204 178 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 OR2AG1Q9H205 316 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 GAL3ST2Q9H3Q3 398 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 TMBIM4Q9HC24 238 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 FRAS1Q86XX4 4008 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 DSCAML1Q8TD84 2053 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 NEURL4Q96JN8 1562 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 CUL9Q8IWT3 2517 aa0.02□□□□□ -2.41
SNORD28B-201ENST00000390993 HEATR5BQ9P2D3 2071 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 CACNA1EQ15878 2313 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 TRAV38-1A0A0B4J264 116 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 A0A0J9YW62 118 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 A0A1W2PPV4 95 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 FUOMA2VDF0 154 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 MEIS3P1A6NDR6 274 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 H0YC42 278 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 GOLGA8RI6L899 631 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 SDCBPO00560 298 aaPredicted RBP0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 LIN7AO14910 233 aaPredicted RBP0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 COCHO43405 550 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 AKR7A2O43488 359 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 MPZL2O60487 215 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 SNAP29O95721 258 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 CRYBA1P05813 215 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 TRGC1P0CF51 173 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 CRYBB3P26998 211 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 CA5AP35218 305 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 CRATP43155 626 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 CA7P43166 264 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 RBM11P57052 281 aaKnown RBP0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 CD164Q04900 197 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 VAMP3Q15836 100 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 MIAQ16674 131 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 HIKESHIQ53FT3 197 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 FAM173BQ6P4H8 233 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 LINC00471Q8N535 108 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 ZNF565Q8N9K5 539 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 OR1L8Q8NGR8 309 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 RPS4Y2Q8TD47 263 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 C12orf43Q96C57 262 aaKnown RBP0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 MAP1LC3CQ9BXW4 147 aa0.01□□□□□ -2.41
SNORD28B-201ENST00000390993 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms