RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 SF3B6Q9Y3B4 125 aaKnown RBP10.68□□□□□ -0.7
KCNQ3-201ENST00000388996 FCGR3AP08637 254 aa10.68□□□□□ -0.7
KCNQ3-201ENST00000388996 STAG3L2P0CL84 134 aa10.68□□□□□ -0.7
KCNQ3-201ENST00000388996 SOSTQ9BQB4 213 aa10.68□□□□□ -0.7
KCNQ3-201ENST00000388996 ZNF385AQ96PM9 386 aaKnown RBP10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 CCL13Q99616 98 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 RNF115Q9Y4L5 304 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 SHISA5Q8N114 240 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 ST6GAL2Q96JF0 529 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 NEURL2Q9BR09 285 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 IGF2P01344 180 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 CD1BP29016 333 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 AP4M1O00189 453 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 HPRT1P00492 218 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 CALHM1Q8IU99 346 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 PRO1933Q9H354 126 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 OR4A5Q8NH83 315 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 WNT2BQ93097 391 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 PACRGQ96M98 296 aaPredicted RBP10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 CEBPEQ15744 281 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 FAM214BQ7L5A3 538 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 BVESQ8NE79 360 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 GPX7Q96SL4 187 aaPredicted RBP10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 TMEM140Q9NV12 185 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 IGHV3-21A0A0B4J1V1 117 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 TRAV20A0A0B4J274 112 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 ZNF735P0CB33 412 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 EBLN2Q6P2I7 272 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 OR1N2Q8NGR9 330 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 CXCL3P19876 107 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 GCSHP23434 173 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 GCSAMQ8N6F7 178 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 AUP1Q9Y679 476 aa10.67□□□□□ -0.7
KCNQ3-201ENST00000388996 AHRRA9YTQ3 701 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 DLL1O00548 723 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 BET1LQ9NYM9 111 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 M0R3E3 92 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 MGST3O14880 152 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 NAT2P11245 290 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 EFNB2P52799 333 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 SYT8Q8NBV8 401 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 CLDN18P56856 261 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 SPRED2Q7Z698 418 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 HDHD3Q9BSH5 251 aaPredicted RBP10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 SFXN3Q9BWM7 321 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 FAM74A7A6NL05 159 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 HIST1H1BP16401 226 aaKnown RBP10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 ATP5J2P56134 94 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 EWSR1Q01844 656 aaKnown RBP eCLIP10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 CYB561D1Q8N8Q1 229 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 PTP4A3O75365 173 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 KLF7O75840 302 aaPredicted RBP10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 LDLRAD3Q86YD5 345 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 TMEM222Q9H0R3 208 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 HILPDAQ9Y5L2 63 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 POLQO75417 2590 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 COLQQ9Y215 455 aaPredicted RBP10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 FOXL2P58012 376 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 C19orf57Q0VDD7 668 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 ADAMTS17Q8TE56 1095 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 DHRS7CA6NNS2 312 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 LOXL3P58215 753 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 RPL8P62917 257 aaKnown RBP10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 SRSF9Q13242 221 aaKnown RBP eCLIP10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 OR10J6PQ8NGY7 276 aa10.66□□□□□ -0.7
KCNQ3-201ENST00000388996 NSUN5P2Q63ZY6 315 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 ZNF488Q96MN9 340 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 CCL19Q99731 98 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 MOSPD3O75425 235 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 SPANXN1Q5VSR9 72 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 ROM1Q03395 351 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 C8orf82Q6P1X6 216 aaPredicted RBP10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 ADAMTS9Q9P2N4 1935 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 CENPVL1A0A0U1RR11 272 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 CEACAM18A8MTB9 384 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 PPIAL4EA0A075B759 164 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 PPIAL4DF5H284 164 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 PPIAL4FP0DN26 164 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 TWIST1Q15672 202 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 ST6GALNAC2Q9UJ37 374 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 PPIAL4AQ9Y536 164 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 TMEM56-RWDD3S4R434 201 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 KIAA1671Q9BY89 1806 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 RAB33BQ9H082 229 aa10.65□□□□□ -0.7
KCNQ3-201ENST00000388996 NUBP1P53384 320 aa10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 VAX1Q5SQQ9 334 aa10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 CBLN2Q8IUK8 224 aa10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 ZNF738Q8NE65 137 aa10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 H3BQ15 152 aa10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 ATXN7O15265 892 aaPredicted RBP10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 PAGE4O60829 102 aa10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 DXOO77932 396 aaKnown RBP10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 NANOS3P60323 173 aaKnown RBP10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 ZP4Q12836 540 aa10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 AURKAIP1Q9NWT8 199 aaPredicted RBP10.65□□□□□ -0.71
KCNQ3-201ENST00000388996 TMSB15BA0A087X1C1 80 aa10.64□□□□□ -0.71
KCNQ3-201ENST00000388996 A0A0J9YW62 118 aa10.64□□□□□ -0.71
KCNQ3-201ENST00000388996 WNT5AP41221 380 aa10.64□□□□□ -0.71
KCNQ3-201ENST00000388996 CD300CQ08708 224 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms