RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 TIMM9Q9Y5J7 89 aa12.52□□□□□ -0.41
SCFD2-201ENST00000388940 PTPRBP23467 1997 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 A0A1W2PPE2 198 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 MBD3L4A6NDZ8 208 aaPredicted RBP12.51□□□□□ -0.41
SCFD2-201ENST00000388940 MBD3L3A6NE82 208 aaPredicted RBP12.51□□□□□ -0.41
SCFD2-201ENST00000388940 MBD3L5A6NJ08 208 aaPredicted RBP12.51□□□□□ -0.41
SCFD2-201ENST00000388940 LRRC30A6NM36 301 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 RAB29O14966 203 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 RAMP3O60896 148 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 EIF2S3P41091 472 aaKnown RBP12.51□□□□□ -0.41
SCFD2-201ENST00000388940 BRWD1-AS2P59051 145 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 RPS23P62266 143 aaKnown RBP12.51□□□□□ -0.41
SCFD2-201ENST00000388940 HTD2P86397 168 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 CENPVQ7Z7K6 275 aaPredicted RBP12.51□□□□□ -0.41
SCFD2-201ENST00000388940 ZNF429Q86V71 674 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 MBD3L2Q8NHZ7 208 aaPredicted RBP12.51□□□□□ -0.41
SCFD2-201ENST00000388940 OR4C12Q96R67 309 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 CISD1Q9NZ45 108 aaKnown RBP12.51□□□□□ -0.41
SCFD2-201ENST00000388940 LAMP3Q9UQV4 416 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 SLC25A15Q9Y619 301 aa12.51□□□□□ -0.41
SCFD2-201ENST00000388940 CHD3Q12873 2000 aaKnown RBP12.51□□□□□ -0.41
SCFD2-201ENST00000388940 C5orf52A6NGY3 159 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 CLDN14O95500 239 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 ARG1P05089 322 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 GPX4P36969 197 aaPredicted RBP12.5□□□□□ -0.41
SCFD2-201ENST00000388940 GLIPR1P48060 266 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 SLC38A11Q08AI6 406 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 PMS2P11Q13670 270 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 ATP6V1FQ16864 119 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 DEFB109BQ30KR1 87 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 FAM90A1Q86YD7 464 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 FAM24BQ8N5W8 94 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 CYB561D1Q8N8Q1 229 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 FAM216AQ8WUB2 273 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 RAB39BQ96DA2 213 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 TAAR6Q96RI8 345 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 OPN3Q9H1Y3 402 aaPredicted RBP12.5□□□□□ -0.41
SCFD2-201ENST00000388940 METRNQ9UJH8 293 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 INTS1Q8N201 2190 aaKnown RBP12.5□□□□□ -0.41
SCFD2-201ENST00000388940 TRBV23-1A0A0A0MS06 115 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 OR2C1O95371 312 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 ADH4P08319 380 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 G6PCP35575 357 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 CFHR2P36980 270 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 ZNF726P1Q15940 193 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 TMEM41BQ5BJD5 291 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 SLC35E3Q7Z769 313 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 OR13A1Q8NGR1 328 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 HSD17B10Q99714 261 aaKnown RBP12.5□□□□□ -0.41
SCFD2-201ENST00000388940 MRPL37Q9BZE1 423 aaKnown RBP12.5□□□□□ -0.41
SCFD2-201ENST00000388940 FZR1Q9UM11 496 aa12.5□□□□□ -0.41
SCFD2-201ENST00000388940 URB1O60287 2271 aaKnown RBP12.5□□□□□ -0.41
SCFD2-201ENST00000388940 ODAMA1E959 279 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 C17orf98A8MV24 154 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 C15orf65H3BRN8 121 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 S1PR2O95136 353 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 CLDN1O95832 211 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 KRASP01116 189 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 ZNF787Q6DD87 383 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 FAM53AQ6NSI3 398 aaPredicted RBP12.49□□□□□ -0.41
SCFD2-201ENST00000388940 SEM1Q6ZVN7 128 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 C1QL4Q86Z23 238 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 ZADH2Q8N4Q0 377 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 ZNF808Q8N4W9 903 aaPredicted RBP12.49□□□□□ -0.41
SCFD2-201ENST00000388940 CD177Q8N6Q3 437 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 LRRC29Q8WV35 223 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 TCTEX1D2Q8WW35 142 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 TAF15Q92804 592 aaKnown RBP eCLIP12.49□□□□□ -0.41
SCFD2-201ENST00000388940 MUCL1Q96DR8 90 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 TVP23CQ96ET8 276 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 TMEM68Q96MH6 324 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 VSIRQ9H7M9 311 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 HEATR1Q9H583 2144 aaKnown RBP12.49□□□□□ -0.41
SCFD2-201ENST00000388940 SPINT2O43291 252 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 PRDX2P32119 198 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 SNRPEP62304 92 aaKnown RBP12.49□□□□□ -0.41
SCFD2-201ENST00000388940 HOXA4Q00056 320 aaPredicted RBP12.49□□□□□ -0.41
SCFD2-201ENST00000388940 ZNF816Q0VGE8 651 aaPredicted RBP12.49□□□□□ -0.41
SCFD2-201ENST00000388940 IGFL3Q6UXB1 125 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 RBMS3Q6XE24 437 aaKnown RBP12.49□□□□□ -0.41
SCFD2-201ENST00000388940 P2RX4Q99571 388 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 NIPSNAP3BQ9BS92 247 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 AGMATQ9BSE5 352 aa12.49□□□□□ -0.41
SCFD2-201ENST00000388940 CXorf65A6NEN9 183 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 SRRM5B3KS81 715 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 ZNF737O75373 536 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 BCL2P10415 239 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 SSTR5P35346 364 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 TAGLN2P37802 199 aaKnown RBP12.48□□□□□ -0.41
SCFD2-201ENST00000388940 DEFA6Q01524 100 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 CR1LQ2VPA4 569 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 RCC1LQ96I51 464 aaKnown RBP12.48□□□□□ -0.41
SCFD2-201ENST00000388940 CIB3Q96Q77 187 aaPredicted RBP12.48□□□□□ -0.41
SCFD2-201ENST00000388940 SIRT7Q9NRC8 400 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 GNG13Q9P2W3 67 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 USF3Q68DE3 2245 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 CACNA1DQ01668 2161 aa12.48□□□□□ -0.41
SCFD2-201ENST00000388940 hCG_1809904A0A1W2PP81 198 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 A0A1W2PR64 198 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 A0A1W2PRV1 198 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms