RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 TSPOP30536 169 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 ATP5G2Q06055 141 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 ZBTB34Q8NCN2 500 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 LHX9Q9NQ69 397 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 CBLN4Q9NTU7 201 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 IGHV3OR16-10A0A075B7F0 116 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 SNAI2O43623 268 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 ZIC3O60481 467 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 CA1P00915 261 aaPredicted RBP5.1□□□□□ -1.59
RFX3-204ENST00000382004 IGHV4-39P01824 125 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 MT-ND6P03923 174 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 RPS20P60866 119 aaKnown RBP5.1□□□□□ -1.59
RFX3-204ENST00000382004 NKG7Q16617 165 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 DDA1Q9BW61 102 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 TNFRSF18Q9Y5U5 241 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 LINC00862A6NCI5 91 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 HLA-DQA1P01909 254 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 TNFSF10P50591 281 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 EFNB2P52799 333 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 PSG9Q00887 426 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 UCN2Q96RP3 112 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 KCNE5Q9UJ90 142 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 IGHV1OR21-1A0A087WYE8 117 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 HPRT1P00492 218 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 MALP21145 153 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 CNTFRP26992 372 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 SNRPD3P62318 126 aaKnown RBP5.1□□□□□ -1.59
RFX3-204ENST00000382004 CD300CQ08708 224 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 C1orf210Q8IVY1 113 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 PMCHL2Q9BQD1 86 aa5.1□□□□□ -1.59
RFX3-204ENST00000382004 TGIF2-C20orf24A0A0A6YYL0 155 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 IGHV3-35A0A0C4DH35 117 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 FOXI3A8MTJ6 420 aaPredicted RBP5.09□□□□□ -1.59
RFX3-204ENST00000382004 EIF3GO75821 320 aaKnown RBP eCLIP5.09□□□□□ -1.59
RFX3-204ENST00000382004 CEACAM4O75871 244 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 CELA2BP08218 269 aaPredicted RBP5.09□□□□□ -1.59
RFX3-204ENST00000382004 MUC1P15941 1255 aaPredicted RBP5.09□□□□□ -1.59
RFX3-204ENST00000382004 HBBP68871 147 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 SRSF5Q13243 272 aaKnown RBP5.09□□□□□ -1.59
RFX3-204ENST00000382004 C1QL3Q5VWW1 255 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 CFAP161Q6P656 301 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 NXT2Q9NPJ8 142 aaKnown RBP5.09□□□□□ -1.59
RFX3-204ENST00000382004 PIKFYVEQ9Y2I7 2098 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 MYOM1P52179 1685 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 IGHV3-66A0A0C4DH42 116 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 DLL1O00548 723 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 CDS2O95674 445 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 IGHV3-48P01763 117 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 ARL14EPLP0DKL9 152 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 LSM6P62312 80 aaKnown RBP5.09□□□□□ -1.59
RFX3-204ENST00000382004 MESTQ5EB52 335 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 MIC13Q5XKP0 118 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 XAF1Q6GPH4 301 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 C9orf62Q8N4C0 152 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 CABIN1Q9Y6J0 2220 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 TMEM229AB2RXF0 380 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 CDC42EP2O14613 210 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 LINC00596Q86U02 117 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 TMEM45BQ96B21 275 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 RARRES2Q99969 163 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 TRAV8-2A0A0B4J237 113 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 GRIFINA4D1Z8 144 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 OR11H12B2RN74 326 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 PIK3C2AO00443 1686 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 CDK2AP2O75956 126 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 IGFBP6P24592 240 aaPredicted RBP5.09□□□□□ -1.59
RFX3-204ENST00000382004 ZNF600Q6ZNG1 722 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 OR11H1Q8NG94 326 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 OR11H2Q8NH07 326 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 AICDAQ9GZX7 198 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 UNC13CQ8NB66 2214 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 SMAD7O15105 426 aaKnown RBP5.09□□□□□ -1.59
RFX3-204ENST00000382004 CTDSPLO15194 276 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 NDUFA3O95167 84 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 TRBV5-4A0A0C4DH59 114 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 TNFSF14O43557 240 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 C10orf35Q96D05 121 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 ZNF414Q96IQ9 312 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 RASL10BQ96S79 203 aa5.09□□□□□ -1.59
RFX3-204ENST00000382004 N4BP2Q86UW6 1770 aaPredicted RBP5.09□□□□□ -1.6
RFX3-204ENST00000382004 NUP98P52948 1817 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 RTTNQ86VV8 2226 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 LIPT2A6NK58 231 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 ZNF98A6NK75 572 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 ISG15P05161 165 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 CD1AP06126 327 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 SEC11BP0C7V7 166 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 RND2P52198 227 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 CKS1BP61024 79 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 CTAG1AP78358 180 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 PAPPA-AS1Q5QFB9 102 aa5.09□□□□□ -1.6
RFX3-204ENST00000382004 FCARP24071 287 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 LCN2P80188 198 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 TP53I13Q8NBR0 393 aaPredicted RBP5.08□□□□□ -1.6
RFX3-204ENST00000382004 ITLN2Q8WWU7 325 aaPredicted RBP5.08□□□□□ -1.6
RFX3-204ENST00000382004 ZNF430Q9H8G1 570 aaPredicted RBP5.08□□□□□ -1.6
RFX3-204ENST00000382004 M0R381 172 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 IGHV3-23P01764 117 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 HOXB3P14651 431 aaPredicted RBP5.08□□□□□ -1.6
RFX3-204ENST00000382004 RPL8P62917 257 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms