RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
SNPH-201ENST00000381867 RNF7Q9UBF6 113 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 MGAMO43451 1857 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 ARID1AO14497 2285 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 TRBV23-1A0A0A0MS06 115 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 IGLV3-21P80748 117 aaPredicted RBP12.1□□□□□ -0.47
SNPH-201ENST00000381867 REC114Q7Z4M0 266 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 OR11H4Q8NGC9 324 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 PRSS27Q9BQR3 290 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 LIMS1P48059 325 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 TCTAP57738 103 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 SLC25A34Q6PIV7 304 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 HIST1H2BAQ96A08 127 aa12.1□□□□□ -0.47
SNPH-201ENST00000381867 HOXA4Q00056 320 aaPredicted RBP12.09□□□□□ -0.47
SNPH-201ENST00000381867 SLC25A38Q96DW6 304 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 SOSTQ9BQB4 213 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 DSPPQ9NZW4 1301 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 GFRA3O60609 400 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 AMY1AP04745 511 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 CCL3P10147 92 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 SPANXN1Q5VSR9 72 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 OR10S1Q8NGN2 331 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 C1RLQ9NZP8 487 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 A0A0U1RQV5 110 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 MUC15Q8N387 334 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 WNT2BQ93097 391 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 METTL1Q9UBP6 276 aaKnown RBP12.09□□□□□ -0.47
SNPH-201ENST00000381867 LEPROTL1O95214 131 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 ZP4Q12836 540 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 TMEM52Q8NDY8 209 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 KCNE5Q9UJ90 142 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 A0A1B0GV90 55 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 J3KRW8 73 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 F2RL2O00254 374 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 HYPMO75409 117 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 PPP1CCP36873 323 aaKnown RBP12.09□□□□□ -0.47
SNPH-201ENST00000381867 ZNF502Q8TBZ5 544 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 TMEM171Q8WVE6 324 aa12.09□□□□□ -0.47
SNPH-201ENST00000381867 DHRS7CA6NNS2 312 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 KBTBD11O94819 623 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 SOD3P08294 240 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 WDR25Q64LD2 544 aaPredicted RBP12.08□□□□□ -0.48
SNPH-201ENST00000381867 NPDC1Q9NQX5 325 aaPredicted RBP12.08□□□□□ -0.48
SNPH-201ENST00000381867 TMEM189A5PLL7 270 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
SNPH-201ENST00000381867 TWIST1Q15672 202 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 GGACTQ9BVM4 153 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 CENPVL1A0A0U1RR11 272 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 TSPAN2O60636 221 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 COX6CP09669 75 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 ASAH2BP0C7U1 165 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 RND3P61587 244 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 DNLZQ5SXM8 178 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 ZNF441Q8N8Z8 693 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 AQP3Q92482 292 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 TAF15Q92804 592 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNPH-201ENST00000381867 TMEM45BQ96B21 275 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 IL36RNQ9UBH0 155 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 LOC107984156A0A0G2JMH3 177 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 ZNF735P0CB33 412 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 H2BFSP57053 126 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 LRRC75BQ2VPJ9 315 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 ASCL5Q7RTU5 278 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 ARL17AQ8IVW1 177 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 FAM216AQ8WUB2 273 aa12.08□□□□□ -0.48
SNPH-201ENST00000381867 NPIPB9F8W1W9 429 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 TRGC1P0CF51 173 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 ERASQ7Z444 233 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 UCN2Q96RP3 112 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 A0A1W2PQM1 296 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 C1orf100Q5SVJ3 147 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 SLC25A40Q8TBP6 338 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 RARRES2Q99969 163 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 PRR33A8MZF0 331 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 FOLR2P14207 255 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 INSIG2Q9Y5U4 225 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 C16orf97H3BN30 126 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 RECKO95980 971 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 BTF3P20290 206 aaKnown RBP12.07□□□□□ -0.48
SNPH-201ENST00000381867 AGAP20933 346 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 ID4P47928 161 aa12.07□□□□□ -0.48
SNPH-201ENST00000381867 ZFP36L2P47974 494 aaKnown RBP12.07□□□□□ -0.48
SNPH-201ENST00000381867 ZNF646O15015 1829 aaPredicted RBP12.07□□□□□ -0.48
SNPH-201ENST00000381867 GLIPR1P48060 266 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 DXOO77932 396 aaKnown RBP12.06□□□□□ -0.48
SNPH-201ENST00000381867 C1QCP02747 245 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 DANCRP0C864 163 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 CEACAM1P13688 526 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 TMEM74BQ9NUR3 256 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 WIPI2Q9Y4P8 454 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 PDCD11Q14690 1871 aaKnown RBP12.06□□□□□ -0.48
SNPH-201ENST00000381867 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
SNPH-201ENST00000381867 TTTY12Q9BZ98 90 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 RBKSQ9H477 322 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 TRBV5-7A0A0A0MS05 114 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 FGF12P61328 243 aa12.06□□□□□ -0.48
SNPH-201ENST00000381867 TEX30Q5JUR7 227 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms