RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 TRAM1Q15629 374 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 CD200R1LQ6Q8B3 271 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 OR5AN1Q8NGI8 311 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 ASCL2Q99929 193 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 RNF5Q99942 180 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 HDHD3Q9BSH5 251 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-204ENST00000380749 TOLLIPQ9H0E2 274 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 ALX4Q9H161 411 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-204ENST00000380749 OR1A1Q9P1Q5 309 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 HSF4Q9ULV5 492 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 SOX15O60248 233 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 SPDEFO95238 335 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 CD37P11049 281 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 CPEP16870 476 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 PSMA1P25786 263 aaKnown RBP13.34□□□□□ -0.27
HMGN1-204ENST00000380749 CEACAM6P40199 344 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 RANBP1P43487 201 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 SLURP1P55000 103 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 RAB11BQ15907 218 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 ACTBL2Q562R1 376 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 UNQ5815/PRO19632Q6UWF5 114 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 PPP1R27Q86WC6 154 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 OR6Q1Q8NGQ2 317 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 TMEM203Q969S6 136 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 TSNAXQ99598 290 aaKnown RBP13.34□□□□□ -0.27
HMGN1-204ENST00000380749 AGMATQ9BSE5 352 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 C11orf54Q9H0W9 315 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-204ENST00000380749 METTL1Q9UBP6 276 aaKnown RBP13.34□□□□□ -0.27
HMGN1-204ENST00000380749 ZNF221Q9UK13 617 aa13.34□□□□□ -0.27
HMGN1-204ENST00000380749 APOA2P02652 100 aa13.33□□□□□ -0.27
HMGN1-204ENST00000380749 HSMCR30P0CW71 290 aa13.33□□□□□ -0.27
HMGN1-204ENST00000380749 IRF3Q14653 427 aa13.33□□□□□ -0.27
HMGN1-204ENST00000380749 FAM89BQ8N5H3 189 aa13.33□□□□□ -0.27
HMGN1-204ENST00000380749 CASTOR1Q8WTX7 329 aa13.33□□□□□ -0.27
HMGN1-204ENST00000380749 DLX4Q92988 240 aaPredicted RBP13.33□□□□□ -0.27
HMGN1-204ENST00000380749 CMSS1Q9BQ75 279 aaKnown RBP13.33□□□□□ -0.27
HMGN1-204ENST00000380749 FAM103A1Q9BTL3 118 aaKnown RBP13.33□□□□□ -0.27
HMGN1-204ENST00000380749 Q9N2K0 584 aa13.33□□□□□ -0.27
HMGN1-204ENST00000380749 TPRKBQ9Y3C4 175 aa13.33□□□□□ -0.27
HMGN1-204ENST00000380749 NUBP2Q9Y5Y2 271 aa13.33□□□□□ -0.27
HMGN1-204ENST00000380749 IGHV4OR15-8A0A075B7B6 117 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 A0A087WW49 117 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 CA2P00918 260 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 OR8U9P0C7N5 309 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 TPPP2P59282 170 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 MRPS15P82914 257 aaKnown RBP13.32□□□□□ -0.28
HMGN1-204ENST00000380749 PITPNAQ00169 270 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 AKIRIN2Q53H80 203 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 PDPNQ86YL7 162 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 OR56B1Q8NGI3 324 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 ARPC1AQ92747 370 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 PTX4Q96A99 478 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 FLYWCH2Q96CP2 140 aaKnown RBP13.32□□□□□ -0.28
HMGN1-204ENST00000380749 ARHGAP5-AS1Q96IT6 56 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 CLCC1Q96S66 551 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 SLA2Q9H6Q3 261 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 AK6Q9Y3D8 172 aaKnown RBP13.32□□□□□ -0.28
HMGN1-204ENST00000380749 FOXI3A8MTJ6 420 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-204ENST00000380749 FCN1O00602 326 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 TFAP2AP05549 437 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 SCTP09683 121 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 EGR2P11161 476 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-204ENST00000380749 VEGFCP49767 419 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 RPS25P62851 125 aaKnown RBP13.32□□□□□ -0.28
HMGN1-204ENST00000380749 MLLT11Q13015 90 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-204ENST00000380749 TPBGQ13641 420 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 PSG5Q15238 335 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 ZNF562Q6V9R5 426 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 DRAXINQ8NBI3 349 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-204ENST00000380749 LFNGQ8NES3 379 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 GFI1Q99684 422 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 GAB2Q9UQC2 676 aa13.32□□□□□ -0.28
HMGN1-204ENST00000380749 ARPC1BO15143 372 aaKnown RBP13.31□□□□□ -0.28
HMGN1-204ENST00000380749 RGS10O43665 173 aa13.31□□□□□ -0.28
HMGN1-204ENST00000380749 IGHV3-11P01762 117 aa13.31□□□□□ -0.28
HMGN1-204ENST00000380749 IGKV1-16P04430 117 aa13.31□□□□□ -0.28
HMGN1-204ENST00000380749 HSPB1P04792 205 aaKnown RBP13.31□□□□□ -0.28
HMGN1-204ENST00000380749 SPNP16150 400 aa13.31□□□□□ -0.28
HMGN1-204ENST00000380749 CALRP27797 417 aaKnown RBP13.31□□□□□ -0.28
HMGN1-204ENST00000380749 SERPINB10P48595 397 aa13.31□□□□□ -0.28
HMGN1-204ENST00000380749 RPS16P62249 146 aaKnown RBP13.31□□□□□ -0.28
HMGN1-204ENST00000380749 ACSM6Q6P461 480 aa13.31□□□□□ -0.28
HMGN1-204ENST00000380749 TMEM91Q6ZNR0 172 aa13.31□□□□□ -0.28
HMGN1-204ENST00000380749 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-204ENST00000380749 FAM3DQ96BQ1 224 aa13.31□□□□□ -0.28
HMGN1-204ENST00000380749 PECRQ9BY49 303 aa13.31□□□□□ -0.28
HMGN1-204ENST00000380749 RDH8Q9NYR8 311 aa13.31□□□□□ -0.28
HMGN1-204ENST00000380749 TRDCB7Z8K6 153 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 C3orf84H3BNL1 204 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 M0R1X1 148 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 TRGV3P03979 118 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 GP9P14770 177 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 AQP4P55087 323 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 ZNF383Q8NA42 475 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 OR4A4PQ8NGN8 299 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 GRPEL2Q8TAA5 225 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 MS4A10Q96PG2 267 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 OR4C12Q96R67 309 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 CCDC90BQ9GZT6 254 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 DUSP21Q9H596 190 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms