RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SLC25A46Q96AG3 418 aa7.36□□□□□ -1.23
HMGN1-202ENST00000380747 ABHD14BQ96IU4 210 aa7.36□□□□□ -1.23
HMGN1-202ENST00000380747 MRPL20Q9BYC9 149 aaKnown RBP7.36□□□□□ -1.23
HMGN1-202ENST00000380747 C11orf54Q9H0W9 315 aaPredicted RBP7.36□□□□□ -1.23
HMGN1-202ENST00000380747 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGN1-202ENST00000380747 RDH8Q9NYR8 311 aa7.36□□□□□ -1.23
HMGN1-202ENST00000380747 PIPOXQ9P0Z9 390 aa7.36□□□□□ -1.23
HMGN1-202ENST00000380747 RNF150Q9ULK6 438 aa7.36□□□□□ -1.23
HMGN1-202ENST00000380747 A0A0A6YYH2 397 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 A6NJ64 397 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 NCBP2LA6PVI3 153 aaKnown RBP7.35□□□□□ -1.23
HMGN1-202ENST00000380747 H3BS24 57 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 M0QZK8 103 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 RAB29O14966 203 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 SSX5O60225 188 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 MOSP00540 346 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 DTYMKP23919 212 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 CD1BP29016 333 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 LSAMPQ13449 338 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 HERPUD1Q15011 391 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 CTF1Q16619 201 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 TMEM95Q3KNT9 176 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 UBE2NLQ5JXB2 153 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 FOXB2Q5VYV0 432 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 ZNF833PQ6ZTB9 187 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 C11orf44Q8N8P7 122 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 OR10J5Q8NHC4 309 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 RBMXL1Q96E39 390 aaKnown RBP7.35□□□□□ -1.23
HMGN1-202ENST00000380747 S100A16Q96FQ6 103 aaKnown RBP7.35□□□□□ -1.23
HMGN1-202ENST00000380747 S1PR3Q99500 378 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 CITED1Q99966 193 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 NABP2Q9BQ15 211 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 GINS4Q9BRT9 223 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 CABLES2Q9BTV7 478 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 AUNIPQ9H7T9 357 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 SERTAD4Q9NUC0 356 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 COMMD3Q9UBI1 195 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 ZNF221Q9UK13 617 aa7.35□□□□□ -1.23
HMGN1-202ENST00000380747 IGKV1D-8A0A087WSZ0 117 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 TRBV6-7A0A0A0MS04 114 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 ITGB1BP1O14713 200 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 AMY1AP04745 511 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 AMY2AP04746 511 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 FCER2P06734 321 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 PTHLHP12272 177 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 GPR12P47775 334 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 RORCP51449 518 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 SRSF7Q16629 238 aaKnown RBP eCLIP7.34□□□□□ -1.23
HMGN1-202ENST00000380747 FAM71F2Q6NXP2 309 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 GLDNQ6ZMI3 551 aaPredicted RBP7.34□□□□□ -1.23
HMGN1-202ENST00000380747 Q6ZS49 121 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 CLVS1Q8IUQ0 354 aaPredicted RBP7.34□□□□□ -1.23
HMGN1-202ENST00000380747 C5orf56Q8N8D9 126 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 ABCG5Q9H222 651 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 DCSTAMPQ9H295 470 aa7.34□□□□□ -1.23
HMGN1-202ENST00000380747 RBM7Q9Y580 266 aaKnown RBP7.34□□□□□ -1.23
HMGN1-202ENST00000380747 J3QRK9 145 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 M0R1X1 148 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 FGF16O43320 207 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 XRCC3O43542 346 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 DIRAS3O95661 229 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 EIF4EP06730 217 aaKnown RBP7.33□□□□□ -1.24
HMGN1-202ENST00000380747 OR8U9P0C7N5 309 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 RPL5P46777 297 aaKnown RBP7.33□□□□□ -1.24
HMGN1-202ENST00000380747 TAS2R20P59543 309 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 ARPC4P59998 168 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 EBI3Q14213 229 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 TMEM69Q5SWH9 247 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 HIST2H2BDQ6DRA6 164 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 MZT2AQ6P582 158 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 FAM131AQ6UXB0 335 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 CENPVQ7Z7K6 275 aaPredicted RBP7.33□□□□□ -1.24
HMGN1-202ENST00000380747 Q8N6K4 173 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 DRAXINQ8NBI3 349 aaPredicted RBP7.33□□□□□ -1.24
HMGN1-202ENST00000380747 OR8U1Q8NH10 309 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 ACOT12Q8WYK0 555 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 RASL11BQ9BPW5 248 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 ZNF251Q9BRH9 671 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 AGMATQ9BSE5 352 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 OR2D2Q9H210 308 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 GHITMQ9H3K2 345 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 ANXA10Q9UJ72 324 aa7.33□□□□□ -1.24
HMGN1-202ENST00000380747 MEIS3P1A6NDR6 274 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 FAM25AB3EWG3 89 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 FAM25CB3EWG5 89 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 FAM25GB3EWG6 89 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 H7C2Y5 167 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 M0QZ24 198 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 HPGDSO60760 199 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 NOL3O60936 208 aaKnown RBP7.32□□□□□ -1.24
HMGN1-202ENST00000380747 CTXN2P0C2S0 81 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 CT45A6P0DMU7 189 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 CT45A5P0DMU8 189 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 CT45A7P0DMV0 189 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 ZNF182P17025 639 aaPredicted RBP7.32□□□□□ -1.24
HMGN1-202ENST00000380747 F2RL1P55085 397 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 MMDQ15546 238 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 SLC35E3Q7Z769 313 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms