RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SPNP16150 400 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 CEACAM6P40199 344 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 TMEM267Q0VDI3 215 aaPredicted RBP13.01□□□□□ -0.33
SMN2-201ENST00000380741 P2RY14Q15391 338 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 MED22Q15528 200 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 ACTBL2Q562R1 376 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 LIPKQ5VXJ0 399 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 PYHIN1Q6K0P9 492 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 CD200R1LQ6Q8B3 271 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 PPP1R27Q86WC6 154 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 DRAXINQ8NBI3 349 aaPredicted RBP13.01□□□□□ -0.33
SMN2-201ENST00000380741 EDARADDQ8WWZ3 215 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 ARPC1AQ92747 370 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 CLCC1Q96S66 551 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 GFI1Q99684 422 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 GHITMQ9H3K2 345 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 METTL1Q9UBP6 276 aaKnown RBP13.01□□□□□ -0.33
SMN2-201ENST00000380741 SACSQ9NZJ4 4579 aa13.01□□□□□ -0.33
SMN2-201ENST00000380741 C3orf84H3BNL1 204 aa13□□□□□ -0.33
SMN2-201ENST00000380741 HSPA12AO43301 675 aa13□□□□□ -0.33
SMN2-201ENST00000380741 PROP1O75360 226 aa13□□□□□ -0.33
SMN2-201ENST00000380741 IGHV3-11P01762 117 aa13□□□□□ -0.33
SMN2-201ENST00000380741 ARSBP15848 533 aa13□□□□□ -0.33
SMN2-201ENST00000380741 ZBTB25P24278 435 aa13□□□□□ -0.33
SMN2-201ENST00000380741 PSG5Q15238 335 aa13□□□□□ -0.33
SMN2-201ENST00000380741 AKIRIN2Q53H80 203 aa13□□□□□ -0.33
SMN2-201ENST00000380741 ACSM6Q6P461 480 aa13□□□□□ -0.33
SMN2-201ENST00000380741 UNQ5815/PRO19632Q6UWF5 114 aa13□□□□□ -0.33
SMN2-201ENST00000380741 SBSPONQ8IVN8 264 aa13□□□□□ -0.33
SMN2-201ENST00000380741 FAM89BQ8N5H3 189 aa13□□□□□ -0.33
SMN2-201ENST00000380741 TMEM203Q969S6 136 aa13□□□□□ -0.33
SMN2-201ENST00000380741 MS4A10Q96PG2 267 aa13□□□□□ -0.33
SMN2-201ENST00000380741 RNF5Q99942 180 aa13□□□□□ -0.33
SMN2-201ENST00000380741 URM1Q9BTM9 101 aaKnown RBP13□□□□□ -0.33
SMN2-201ENST00000380741 RNF150Q9ULK6 438 aa13□□□□□ -0.33
SMN2-201ENST00000380741 FOXI3A8MTJ6 420 aaPredicted RBP12.99□□□□□ -0.33
SMN2-201ENST00000380741 SLC17A2O00624 439 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 CA2P00918 260 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 IGKV1-16P04430 117 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 SCTP09683 121 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 GP9P14770 177 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 CPEP16870 476 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 LINC00205P59089 165 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 ZNF562Q6V9R5 426 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 TMEM91Q6ZNR0 172 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 OVCH2Q7RTZ1 564 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 OR6Q1Q8NGQ2 317 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 UFD1Q92890 307 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 PTX4Q96A99 478 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 VCXQ9H320 206 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 Q9N2K0 584 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 C12orf4Q9NQ89 552 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 HSF4Q9ULV5 492 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 MGAT4AQ9UM21 535 aa12.99□□□□□ -0.33
SMN2-201ENST00000380741 HSPB1P04792 205 aaKnown RBP12.98□□□□□ -0.33
SMN2-201ENST00000380741 OR8U9P0C7N5 309 aa12.98□□□□□ -0.33
SMN2-201ENST00000380741 FRMD6-AS1P0C7T7 363 aa12.98□□□□□ -0.33
SMN2-201ENST00000380741 TMEM50BP56557 158 aa12.98□□□□□ -0.33
SMN2-201ENST00000380741 TPPP2P59282 170 aa12.98□□□□□ -0.33
SMN2-201ENST00000380741 IRF3Q14653 427 aa12.98□□□□□ -0.33
SMN2-201ENST00000380741 ZNF383Q8NA42 475 aa12.98□□□□□ -0.33
SMN2-201ENST00000380741 ARHGAP5-AS1Q96IT6 56 aa12.98□□□□□ -0.33
SMN2-201ENST00000380741 RCHY1Q96PM5 261 aa12.98□□□□□ -0.33
SMN2-201ENST00000380741 SLA2Q9H6Q3 261 aa12.98□□□□□ -0.33
SMN2-201ENST00000380741 SCN3BQ9NY72 215 aa12.98□□□□□ -0.33
SMN2-201ENST00000380741 AK6Q9Y3D8 172 aaKnown RBP12.98□□□□□ -0.33
SMN2-201ENST00000380741 IGKV1-6A0A0C4DH72 117 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 TRIM64CA6NLI5 447 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 SPDEFO95238 335 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 TFAP2AP05549 437 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 VEGFCP49767 419 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 CLDN12P56749 244 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 RPS16P62249 146 aaKnown RBP12.97□□□□□ -0.33
SMN2-201ENST00000380741 RPS25P62851 125 aaKnown RBP12.97□□□□□ -0.33
SMN2-201ENST00000380741 PITPNAQ00169 270 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 RAB11BQ15907 218 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 FLYWCH2Q96CP2 140 aaKnown RBP12.97□□□□□ -0.33
SMN2-201ENST00000380741 RHOVQ96L33 236 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 TSNAXQ99598 290 aaKnown RBP12.97□□□□□ -0.33
SMN2-201ENST00000380741 CMSS1Q9BQ75 279 aaKnown RBP12.97□□□□□ -0.33
SMN2-201ENST00000380741 PECRQ9BY49 303 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 ZNF221Q9UK13 617 aa12.97□□□□□ -0.33
SMN2-201ENST00000380741 TRGV3P03979 118 aa12.96□□□□□ -0.33
SMN2-201ENST00000380741 HSMCR30P0CW71 290 aa12.96□□□□□ -0.33
SMN2-201ENST00000380741 CD40LGP29965 261 aa12.96□□□□□ -0.33
SMN2-201ENST00000380741 PLAC9Q5JTB6 97 aa12.96□□□□□ -0.33
SMN2-201ENST00000380741 HAPLN4Q86UW8 402 aa12.96□□□□□ -0.33
SMN2-201ENST00000380741 PDPNQ86YL7 162 aa12.96□□□□□ -0.33
SMN2-201ENST00000380741 GRPEL2Q8TAA5 225 aa12.96□□□□□ -0.33
SMN2-201ENST00000380741 MUC7Q8TAX7 377 aa12.96□□□□□ -0.33
SMN2-201ENST00000380741 OR4C12Q96R67 309 aa12.96□□□□□ -0.33
SMN2-201ENST00000380741 RDH8Q9NYR8 311 aa12.96□□□□□ -0.33
SMN2-201ENST00000380741 RYR2Q92736 4967 aa12.96□□□□□ -0.34
SMN2-201ENST00000380741 ARPC1BO15143 372 aaKnown RBP12.95□□□□□ -0.34
SMN2-201ENST00000380741 SLC25A17O43808 307 aa12.95□□□□□ -0.34
SMN2-201ENST00000380741 ARL6IP5O75915 188 aa12.95□□□□□ -0.34
SMN2-201ENST00000380741 APOA2P02652 100 aa12.95□□□□□ -0.34
SMN2-201ENST00000380741 SSBP2P81877 361 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms