RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ZNF439Q8NDP4 499 aa14.3□□□□□ -0.12
THUMPD2-201ENST00000378727 TCTEX1D2Q8WW35 142 aa14.3□□□□□ -0.12
THUMPD2-201ENST00000378727 ST8SIA2Q92186 375 aa14.3□□□□□ -0.12
THUMPD2-201ENST00000378727 LSM10Q969L4 123 aaKnown RBP14.3□□□□□ -0.12
THUMPD2-201ENST00000378727 RAB1BQ9H0U4 201 aa14.3□□□□□ -0.12
THUMPD2-201ENST00000378727 C11orf1Q9H5F2 150 aa14.3□□□□□ -0.12
THUMPD2-201ENST00000378727 ZFP57Q9NU63 452 aa14.3□□□□□ -0.12
THUMPD2-201ENST00000378727 RALYQ9UKM9 306 aaKnown RBP14.3□□□□□ -0.12
THUMPD2-201ENST00000378727 PIGBOS1A0A0B4J2F0 54 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 A0A1W2PPE3 182 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 RPS10-NUDT3A0A1W2PQS6 291 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 PITX3O75364 302 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 FSTL3O95633 263 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 IGHV2-70P01814 119 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 CCL3L1P16619 93 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 EPHA1P21709 976 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 NUP62P37198 522 aaPredicted RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 NKX2-1P43699 371 aaPredicted RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 THOC7Q6I9Y2 204 aaKnown RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 C1orf229Q6ZS94 237 aaPredicted RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 PCNPQ8WW12 178 aaKnown RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 H1FXQ92522 213 aaKnown RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 HSD17B10Q99714 261 aaKnown RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 ABHD14AQ9BUJ0 271 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 ZNF471Q9BX82 626 aaPredicted RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 CYTL1Q9NRR1 136 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 ZFYVE26Q68DK2 2539 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 B8ZZF3 427 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 E5RGE8 158 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 F5H0A9 414 aaPredicted RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 SLC25A6P12236 298 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 RPL12P30050 165 aaKnown RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 ID3Q02535 119 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 RPL39P5Q59GN2 51 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 SPAG16Q8N0X2 631 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 RPUSD1Q9UJJ7 312 aaKnown RBP14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 ITGB1BP2Q9UKP3 347 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 NSG2Q9Y328 171 aa14.29□□□□□ -0.12
THUMPD2-201ENST00000378727 A0A1B0GU03 582 aa14.28□□□□□ -0.12
THUMPD2-201ENST00000378727 DUTP33316 252 aaKnown RBP14.28□□□□□ -0.12
THUMPD2-201ENST00000378727 AKR1C2P52895 323 aa14.28□□□□□ -0.12
THUMPD2-201ENST00000378727 POLR2GP62487 172 aaKnown RBP eCLIP14.28□□□□□ -0.12
THUMPD2-201ENST00000378727 UBA52P62987 128 aaKnown RBP14.28□□□□□ -0.12
THUMPD2-201ENST00000378727 NCR3LG1Q68D85 454 aa14.28□□□□□ -0.12
THUMPD2-201ENST00000378727 LAMP3Q9UQV4 416 aa14.28□□□□□ -0.12
THUMPD2-201ENST00000378727 ZNF816Q0VGE8 651 aaPredicted RBP14.27□□□□□ -0.12
THUMPD2-201ENST00000378727 TMEM30BQ3MIR4 351 aa14.27□□□□□ -0.12
THUMPD2-201ENST00000378727 RNASE11Q8TAA1 199 aaKnown RBP14.27□□□□□ -0.12
THUMPD2-201ENST00000378727 ZNF714Q96N38 554 aa14.27□□□□□ -0.12
THUMPD2-201ENST00000378727 MAGT1Q9H0U3 335 aa14.27□□□□□ -0.12
THUMPD2-201ENST00000378727 GAL3ST2Q9H3Q3 398 aa14.27□□□□□ -0.12
THUMPD2-201ENST00000378727 FAM212BQ9NTI7 297 aaPredicted RBP14.27□□□□□ -0.12
THUMPD2-201ENST00000378727 KIAA1324LA8MWY0 1029 aaPredicted RBP14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 S1PR2O95136 353 aa14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 NXPH3O95157 252 aa14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 RAB7AP51149 207 aa14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 AVPI1Q5T686 147 aa14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 ODF3L1Q8IXM7 274 aa14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 SCARB1Q8WTV0 552 aa14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 GSX2Q9BZM3 304 aa14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 PLEKHA2Q9HB19 425 aa14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 CACNG5Q9UF02 275 aa14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 GAB2Q9UQC2 676 aa14.27□□□□□ -0.13
THUMPD2-201ENST00000378727 M0R1X1 148 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 P2RY1P47900 373 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 GNG10P50151 68 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 CLLU1Q5K131 121 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 HEPN1Q6WQI6 88 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 TCTEX1D1Q8N7M0 179 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 OR10A7Q8NGE5 316 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 NEU4Q8WWR8 484 aaPredicted RBP14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 LPAR3Q9UBY5 353 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 DOCK11Q5JSL3 2073 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 SAA2-SAA4A0A096LPE2 208 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 P0C879 139 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 SAA2P0DJI9 122 aaPredicted RBP14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 CLEC9AQ6UXN8 241 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 ZNF841Q6ZN19 808 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 STOML3Q8TAV4 291 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 ZNF251Q9BRH9 671 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 MMP24Q9Y5R2 645 aa14.26□□□□□ -0.13
THUMPD2-201ENST00000378727 A6NNC1 897 aa14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 SSSCA1O60232 199 aa14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 TMEM50AO95807 157 aa14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 KRASP01116 189 aa14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 RNF224P0DH78 156 aa14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 G6PCP35575 357 aa14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 DLX6P56179 175 aa14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 MRPS11P82912 194 aaKnown RBP14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 SLC25A48Q6ZT89 311 aaKnown RBP14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 BSCL2Q96G97 398 aaPredicted RBP14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 UBTD1Q9HAC8 227 aa14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 ZC4H2Q9NQZ6 224 aa14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 ZNRD1Q9P1U0 126 aa14.25□□□□□ -0.13
THUMPD2-201ENST00000378727 DAOP14920 347 aa14.24□□□□□ -0.13
THUMPD2-201ENST00000378727 TMEM33P57088 247 aa14.24□□□□□ -0.13
THUMPD2-201ENST00000378727 TMEM155Q4W5P6 130 aa14.24□□□□□ -0.13
THUMPD2-201ENST00000378727 RAB29O14966 203 aa14.24□□□□□ -0.13
THUMPD2-201ENST00000378727 LYG1Q8N1E2 194 aa14.24□□□□□ -0.13
THUMPD2-201ENST00000378727 ZNF843Q8N446 348 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms