RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 CREBBPQ92793 2442 aa10.52□□□□□ -0.72
CBWD3-203ENST00000377344 PGLYRP1O75594 196 aaPredicted RBP10.52□□□□□ -0.73
CBWD3-203ENST00000377344 DHFRP00374 187 aa10.52□□□□□ -0.73
CBWD3-203ENST00000377344 HTR1DP28221 377 aa10.52□□□□□ -0.73
CBWD3-203ENST00000377344 TAS2R31P59538 309 aa10.52□□□□□ -0.73
CBWD3-203ENST00000377344 C1orf229Q6ZS94 237 aaPredicted RBP10.52□□□□□ -0.73
CBWD3-203ENST00000377344 TBC1D26Q86UD7 250 aa10.52□□□□□ -0.73
CBWD3-203ENST00000377344 SLC25A42Q86VD7 318 aa10.52□□□□□ -0.73
CBWD3-203ENST00000377344 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.52□□□□□ -0.73
CBWD3-203ENST00000377344 ZBTB34Q8NCN2 500 aa10.52□□□□□ -0.73
CBWD3-203ENST00000377344 OR51H1Q8NH63 302 aa10.52□□□□□ -0.73
CBWD3-203ENST00000377344 C5orf30Q96GV9 206 aa10.52□□□□□ -0.73
CBWD3-203ENST00000377344 FLNAP21333 2647 aaKnown RBP10.52□□□□□ -0.73
CBWD3-203ENST00000377344 ZANQ9Y493 2812 aa10.52□□□□□ -0.73
CBWD3-203ENST00000377344 OTOGQ6ZRI0 2925 aa10.52□□□□□ -0.73
CBWD3-203ENST00000377344 ODF3BA8MYP8 253 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 MPPED1O15442 326 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 OR4E1P0C645 316 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 IGHV4-38-2P0DP08 117 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 DIAPH2-AS1Q14236 149 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 TMEM128Q5BJH2 165 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 RUSC1-AS1Q66K80 236 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 BRD3OSQ6XYD6 125 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 LHFPL4Q7Z7J7 247 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 SGPP2Q8IWX5 399 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 TMEM230Q96A57 120 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 RPEQ96AT9 228 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 HILPDAQ9Y5L2 63 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 CELSR1Q9NYQ6 3014 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 IGHV1-69DA0A0B4J2H0 117 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 LEUTXA8MZ59 168 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 NPFFO15130 113 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 PROP1O75360 226 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 IGHV1-69P01742 117 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 VSIG10L2P0DP72 767 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 CEACAM3P40198 252 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 LINC00205P59089 165 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 PPP1R1AQ13522 171 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 MSMO1Q15800 293 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 TGIF2LXQ8IUE1 241 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 TCTEX1D2Q8WW35 142 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 ZNF251Q9BRH9 671 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 DPM3Q9P2X0 92 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 GAB2Q9UQC2 676 aa10.51□□□□□ -0.73
CBWD3-203ENST00000377344 CRYM-AS1A6NIL9 109 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 RNF212BA8MTL3 300 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 CD5LO43866 347 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 HLA-AP01891 365 aaKnown RBP10.5□□□□□ -0.73
CBWD3-203ENST00000377344 EPHA1P21709 976 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 SAA4P35542 130 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 RAG2P55895 527 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 RND3P61587 244 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 CATR1Q13166 79 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 CBX3Q13185 183 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 SLC9A3R2Q15599 337 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 TATDN3Q17R31 274 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 OR2B11Q5JQS5 317 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 C11orf88Q6PI97 169 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 GLDNQ6ZMI3 551 aaPredicted RBP10.5□□□□□ -0.73
CBWD3-203ENST00000377344 ZNF833PQ6ZTB9 187 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 KCTD9Q7L273 389 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 OR52B4Q8NGK2 314 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 CASTOR1Q8WTX7 329 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 HSD17B10Q99714 261 aaKnown RBP10.5□□□□□ -0.73
CBWD3-203ENST00000377344 SEC22CQ9BRL7 303 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 ALX4Q9H161 411 aaPredicted RBP10.5□□□□□ -0.73
CBWD3-203ENST00000377344 NAA60Q9H7X0 242 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 YAE1D1Q9NRH1 226 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 KCNIP3Q9Y2W7 256 aa10.5□□□□□ -0.73
CBWD3-203ENST00000377344 SETXQ7Z333 2677 aaKnown RBP10.5□□□□□ -0.73
CBWD3-203ENST00000377344 C3orf85A0A1B0GTC6 90 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 LINC00473A8K010 186 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 CYSRT1A8MQ03 144 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 GAPDHP04406 335 aaKnown RBP10.49□□□□□ -0.73
CBWD3-203ENST00000377344 F2RP25116 425 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 PAX6P26367 422 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 DUTP33316 252 aaKnown RBP10.49□□□□□ -0.73
CBWD3-203ENST00000377344 MECP2P51608 486 aaKnown RBP10.49□□□□□ -0.73
CBWD3-203ENST00000377344 ZNF137PP52743 207 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 RPL30P62888 115 aaKnown RBP10.49□□□□□ -0.73
CBWD3-203ENST00000377344 SSX2Q16385 188 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 SP6Q3SY56 376 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 MIDNQ504T8 468 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 KLF17Q5JT82 389 aaPredicted RBP10.49□□□□□ -0.73
CBWD3-203ENST00000377344 LDLRAD2Q5SZI1 272 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 TPTE2P1Q5T6R2 138 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 SPNS3Q6ZMD2 512 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 ZNF66Q6ZN08 573 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 C17orf50Q8WW18 174 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 ST6GALNAC6Q969X2 333 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 MRPL20Q9BYC9 149 aaKnown RBP10.49□□□□□ -0.73
CBWD3-203ENST00000377344 TBL2Q9Y4P3 447 aaKnown RBP10.49□□□□□ -0.73
CBWD3-203ENST00000377344 LY6LH3BQJ8 138 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 PRAF2O60831 178 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 IFNA2P01563 188 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 OR5AC1P0C628 307 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 ANXA3P12429 323 aa10.49□□□□□ -0.73
CBWD3-203ENST00000377344 UBE2MP61081 183 aaKnown RBP10.49□□□□□ -0.73
CBWD3-203ENST00000377344 SUPT4H1P63272 117 aaKnown RBP10.49□□□□□ -0.73
CBWD3-203ENST00000377344 KRTAP1-1Q07627 177 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms