RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 TFAP2AP05549 437 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 CT45A6P0DMU7 189 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 CT45A5P0DMU8 189 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 CT45A7P0DMV0 189 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 DEFA6Q01524 100 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 IGSF11Q5DX21 431 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 HIST2H2BDQ6DRA6 164 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 FAM131AQ6UXB0 335 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 NPBQ8NG41 125 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 SPATA2Q9UM82 520 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 GAB2Q9UQC2 676 aa17.46■□□□□ 0.39
SRM-201ENST00000376957 CLEC2LP0C7M8 214 aa17.45■□□□□ 0.38
SRM-201ENST00000376957 OR8U9P0C7N5 309 aa17.45■□□□□ 0.38
SRM-201ENST00000376957 TAGLNQ01995 201 aaKnown RBP17.45■□□□□ 0.38
SRM-201ENST00000376957 OR5AN1Q8NGI8 311 aa17.45■□□□□ 0.38
SRM-201ENST00000376957 OR8U1Q8NH10 309 aa17.45■□□□□ 0.38
SRM-201ENST00000376957 YIPF6Q96EC8 236 aa17.45■□□□□ 0.38
SRM-201ENST00000376957 PARP12Q9H0J9 701 aaKnown RBP17.45■□□□□ 0.38
SRM-201ENST00000376957 LINC00527Q9UJ94 153 aa17.45■□□□□ 0.38
SRM-201ENST00000376957 CD33P20138 364 aa17.44■□□□□ 0.38
SRM-201ENST00000376957 C5orf64Q2M2E5 130 aa17.44■□□□□ 0.38
SRM-201ENST00000376957 TCTEX1D4Q5JR98 221 aa17.44■□□□□ 0.38
SRM-201ENST00000376957 CXorf66Q5JRM2 361 aaPredicted RBP17.44■□□□□ 0.38
SRM-201ENST00000376957 PDPNQ86YL7 162 aa17.44■□□□□ 0.38
SRM-201ENST00000376957 MAFIPQ8WZ33 124 aa17.44■□□□□ 0.38
SRM-201ENST00000376957 S100A16Q96FQ6 103 aaKnown RBP17.44■□□□□ 0.38
SRM-201ENST00000376957 TSNAXQ99598 290 aaKnown RBP17.44■□□□□ 0.38
SRM-201ENST00000376957 OR2D2Q9H210 308 aa17.44■□□□□ 0.38
SRM-201ENST00000376957 ZNF580Q9UK33 172 aa17.44■□□□□ 0.38
SRM-201ENST00000376957 TMEM235A6NFC5 223 aa17.43■□□□□ 0.38
SRM-201ENST00000376957 ADARB2-AS1A8MUL3 147 aa17.43■□□□□ 0.38
SRM-201ENST00000376957 NUDT19A8MXV4 375 aa17.43■□□□□ 0.38
SRM-201ENST00000376957 H0YJW9 148 aa17.43■□□□□ 0.38
SRM-201ENST00000376957 M0R1X1 148 aa17.43■□□□□ 0.38
SRM-201ENST00000376957 HLA-DRB1P01911 266 aa17.43■□□□□ 0.38
SRM-201ENST00000376957 IGF1P05019 195 aa17.43■□□□□ 0.38
SRM-201ENST00000376957 ZNF260Q3ZCT1 412 aa17.43■□□□□ 0.38
SRM-201ENST00000376957 C10orf99Q6UWK7 81 aa17.43■□□□□ 0.38
SRM-201ENST00000376957 TRRAPQ9Y4A5 3859 aa17.43■□□□□ 0.38
SRM-201ENST00000376957 TRAV18A0A075B6X5 111 aa17.42■□□□□ 0.38
SRM-201ENST00000376957 LINC01548A6NM66 108 aa17.42■□□□□ 0.38
SRM-201ENST00000376957 SLC22A5O76082 557 aa17.42■□□□□ 0.38
SRM-201ENST00000376957 NDUFA3O95167 84 aa17.42■□□□□ 0.38
SRM-201ENST00000376957 ELANEP08246 267 aa17.42■□□□□ 0.38
SRM-201ENST00000376957 RPS16P62249 146 aaKnown RBP17.42■□□□□ 0.38
SRM-201ENST00000376957 LSM3P62310 102 aaKnown RBP17.42■□□□□ 0.38
SRM-201ENST00000376957 RPL23AP62750 156 aaKnown RBP17.42■□□□□ 0.38
SRM-201ENST00000376957 CNIH2Q6PI25 160 aa17.42■□□□□ 0.38
SRM-201ENST00000376957 TMEM65Q6PI78 240 aa17.42■□□□□ 0.38
SRM-201ENST00000376957 GLDNQ6ZMI3 551 aaPredicted RBP17.42■□□□□ 0.38
SRM-201ENST00000376957 DRAXINQ8NBI3 349 aaPredicted RBP17.42■□□□□ 0.38
SRM-201ENST00000376957 FLYWCH2Q96CP2 140 aaKnown RBP17.42■□□□□ 0.38
SRM-201ENST00000376957 ADTRPQ96IZ2 230 aa17.42■□□□□ 0.38
SRM-201ENST00000376957 OR51J1Q9H342 316 aa17.42■□□□□ 0.38
SRM-201ENST00000376957 RRHO14718 337 aa17.41■□□□□ 0.38
SRM-201ENST00000376957 RRASP10301 218 aa17.41■□□□□ 0.38
SRM-201ENST00000376957 FOXE3Q13461 319 aa17.41■□□□□ 0.38
SRM-201ENST00000376957 ZNF660Q6AZW8 331 aaPredicted RBP17.41■□□□□ 0.38
SRM-201ENST00000376957 NUDCD2Q8WVJ2 157 aa17.41■□□□□ 0.38
SRM-201ENST00000376957 HSPB9Q9BQS6 159 aa17.41■□□□□ 0.38
SRM-201ENST00000376957 SLC35D1Q9NTN3 355 aa17.41■□□□□ 0.38
SRM-201ENST00000376957 SPDEFO95238 335 aa17.4■□□□□ 0.38
SRM-201ENST00000376957 DUS4LO95620 317 aaKnown RBP17.4■□□□□ 0.38
SRM-201ENST00000376957 RPS19P39019 145 aaKnown RBP17.4■□□□□ 0.38
SRM-201ENST00000376957 CBX5P45973 191 aa17.4■□□□□ 0.38
SRM-201ENST00000376957 THBS3P49746 956 aa17.4■□□□□ 0.38
SRM-201ENST00000376957 ARPC4P59998 168 aa17.4■□□□□ 0.38
SRM-201ENST00000376957 TMEM267Q0VDI3 215 aaPredicted RBP17.4■□□□□ 0.38
SRM-201ENST00000376957 RTL8BQ17RB0 113 aa17.4■□□□□ 0.38
SRM-201ENST00000376957 H1FOOQ8IZA3 346 aaPredicted RBP17.4■□□□□ 0.38
SRM-201ENST00000376957 OR5H6Q8NGV6 325 aa17.4■□□□□ 0.38
SRM-201ENST00000376957 KCTD12Q96CX2 325 aaKnown RBP17.4■□□□□ 0.38
SRM-201ENST00000376957 FUNDC2Q9BWH2 189 aa17.4■□□□□ 0.38
SRM-201ENST00000376957 PARP11Q9NR21 331 aa17.4■□□□□ 0.38
SRM-201ENST00000376957 ANXA10Q9UJ72 324 aa17.4■□□□□ 0.38
SRM-201ENST00000376957 ELF5Q9UKW6 265 aaPredicted RBP17.4■□□□□ 0.38
SRM-201ENST00000376957 TRIM64CA6NLI5 447 aa17.39■□□□□ 0.37
SRM-201ENST00000376957 CNTFRP26992 372 aa17.39■□□□□ 0.37
SRM-201ENST00000376957 LGALS7P47929 136 aa17.39■□□□□ 0.37
SRM-201ENST00000376957 LUMP51884 338 aaPredicted RBP17.39■□□□□ 0.37
SRM-201ENST00000376957 UBE2NLQ5JXB2 153 aa17.39■□□□□ 0.37
SRM-201ENST00000376957 ZNF695Q8IW36 515 aa17.39■□□□□ 0.37
SRM-201ENST00000376957 ZNF383Q8NA42 475 aa17.39■□□□□ 0.37
SRM-201ENST00000376957 SLC25A38Q96DW6 304 aa17.39■□□□□ 0.37
SRM-201ENST00000376957 RITA1Q96K30 269 aa17.39■□□□□ 0.37
SRM-201ENST00000376957 FBXL15Q9H469 300 aa17.39■□□□□ 0.37
SRM-201ENST00000376957 SDHAF2Q9NX18 166 aa17.39■□□□□ 0.37
SRM-201ENST00000376957 IGHG4P01861 327 aa17.38■□□□□ 0.37
SRM-201ENST00000376957 CD40LGP29965 261 aa17.38■□□□□ 0.37
SRM-201ENST00000376957 TCTEX1D1Q8N7M0 179 aa17.38■□□□□ 0.37
SRM-201ENST00000376957 KLHL30-AS1Q8NEE0 82 aa17.38■□□□□ 0.37
SRM-201ENST00000376957 ABHD5Q8WTS1 349 aa17.38■□□□□ 0.37
SRM-201ENST00000376957 SLC25A46Q96AG3 418 aa17.38■□□□□ 0.37
SRM-201ENST00000376957 METTL1Q9UBP6 276 aaKnown RBP17.38■□□□□ 0.37
SRM-201ENST00000376957 OR2W1Q9Y3N9 320 aa17.38■□□□□ 0.37
SRM-201ENST00000376957 IGHV7-81A0A0B4J1V7 117 aa17.37■□□□□ 0.37
SRM-201ENST00000376957 TRAV41A0A0B4J266 112 aa17.37■□□□□ 0.37
SRM-201ENST00000376957 SMIM31A0A1B0GVY4 71 aa17.37■□□□□ 0.37
SRM-201ENST00000376957 C1QL4Q86Z23 238 aa17.37■□□□□ 0.37
SRM-201ENST00000376957 SAMD12Q8N8I0 201 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms