RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 GPR146Q96CH1 333 aa10.7□□□□□ -0.7
TRIM40-206ENST00000376724 AGMATQ9BSE5 352 aa10.7□□□□□ -0.7
TRIM40-206ENST00000376724 MS4A7Q9GZW8 240 aaPredicted RBP10.7□□□□□ -0.7
TRIM40-206ENST00000376724 CLN8Q9UBY8 286 aa10.7□□□□□ -0.7
TRIM40-206ENST00000376724 RALYQ9UKM9 306 aaKnown RBP10.7□□□□□ -0.7
TRIM40-206ENST00000376724 POMT1Q9Y6A1 747 aa10.7□□□□□ -0.7
TRIM40-206ENST00000376724 ARFGEF3Q5TH69 2177 aa10.7□□□□□ -0.7
TRIM40-206ENST00000376724 E5RGE8 158 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 YPEL1O60688 119 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 CLDN1O95832 211 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 CGB3P0DN86 165 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 CGB7P0DN87 165 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 LPAR6P43657 344 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 HOXA1P49639 335 aaPredicted RBP10.69□□□□□ -0.7
TRIM40-206ENST00000376724 ZNF134P52741 427 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 ZNF816Q0VGE8 651 aaPredicted RBP10.69□□□□□ -0.7
TRIM40-206ENST00000376724 ITLN2Q8WWU7 325 aaPredicted RBP10.69□□□□□ -0.7
TRIM40-206ENST00000376724 YPEL2Q96QA6 119 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 TMEM204Q9BSN7 226 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 NCOR1P1Q9H4R4 102 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 ZFP57Q9NU63 452 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 NSG2Q9Y328 171 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 HCFC1P51610 2035 aa10.69□□□□□ -0.7
TRIM40-206ENST00000376724 NUPL2O15504 423 aaKnown RBP10.68□□□□□ -0.7
TRIM40-206ENST00000376724 SSSCA1O60232 199 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 WNT2P09544 360 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 COL8A2P25067 703 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 CATR1Q13166 79 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 FAM74A1Q5RGS3 127 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 CLRN3Q8NCR9 226 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 H1FXQ92522 213 aaKnown RBP10.68□□□□□ -0.7
TRIM40-206ENST00000376724 SMIM3Q9BZL3 60 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 C19orf12Q9NSK7 152 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 PFDN2Q9UHV9 154 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 HIVEP3Q5T1R4 2406 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 hADV38S2A0JD32 116 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 LINC00473A8K010 186 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 C17orf98A8MV24 154 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 SLC31A2O15432 143 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 NDUFB3O43676 98 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 FCN3O75636 299 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 IGKV1-5P01602 117 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 ERVFRD-1P60508 538 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 EIF4EBP1Q13541 118 aaPredicted RBP10.68□□□□□ -0.7
TRIM40-206ENST00000376724 Q6ZRM9 215 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 SPAG16Q8N0X2 631 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 DMBX1Q8NFW5 382 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 SAV1Q9H4B6 383 aaPredicted RBP10.68□□□□□ -0.7
TRIM40-206ENST00000376724 RAB9BQ9NP90 201 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 CYTL1Q9NRR1 136 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 CACNG5Q9UF02 275 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 ACACBO00763 2458 aa10.68□□□□□ -0.7
TRIM40-206ENST00000376724 CLEC18AA5D8T8 446 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 ZNF729A6NN14 1252 aaPredicted RBP10.67□□□□□ -0.7
TRIM40-206ENST00000376724 DNASE2O00115 360 aaPredicted RBP10.67□□□□□ -0.7
TRIM40-206ENST00000376724 MMP23AO75900 390 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 FGF2P09038 288 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 RPL31P62899 125 aaKnown RBP10.67□□□□□ -0.7
TRIM40-206ENST00000376724 RPL39P5Q59GN2 51 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 PRAMEF5Q5TYX0 476 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 CLEC18CQ8NCF0 446 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 CXorf58Q96LI9 332 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 PLEKHA2Q9HB19 425 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 GFOD1Q9NXC2 390 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 IDI2-AS1Q9NZ38 188 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 PIGBOS1A0A0B4J2F0 54 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 A0A1B0GU03 582 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 WRBO00258 174 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 DVL1O14640 695 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 LY6HO94772 140 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 KRASP01116 189 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 TPT1P13693 172 aaKnown RBP10.67□□□□□ -0.7
TRIM40-206ENST00000376724 G6PCP35575 357 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 GNG10P50151 68 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 CAV2P51636 162 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 TMEM33P57088 247 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 LRRC10Q5BKY1 277 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 HSD17B13Q7Z5P4 300 aaPredicted RBP10.67□□□□□ -0.7
TRIM40-206ENST00000376724 STPG2Q8N412 459 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 BSCL2Q96G97 398 aaPredicted RBP10.67□□□□□ -0.7
TRIM40-206ENST00000376724 CTSZQ9UBR2 303 aa10.67□□□□□ -0.7
TRIM40-206ENST00000376724 ABCA4P78363 2273 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 TANC2Q9HCD6 1990 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 M0R1X1 148 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 TNFRSF13BO14836 293 aaPredicted RBP10.66□□□□□ -0.7
TRIM40-206ENST00000376724 PROP1O75360 226 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 S1PR2O95136 353 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 NMBP08949 121 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 CCL3L1P16619 93 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 PVALBP20472 110 aaPredicted RBP10.66□□□□□ -0.7
TRIM40-206ENST00000376724 P2RY1P47900 373 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 BRWD1-AS2P59051 145 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 VAMP2P63027 116 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 ID3Q02535 119 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 CT45A1Q5HYN5 189 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 RPL7L1Q6DKI1 246 aaKnown RBP10.66□□□□□ -0.7
TRIM40-206ENST00000376724 ZNF66Q6ZN08 573 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 EIF4E3Q8N5X7 224 aaKnown RBP10.66□□□□□ -0.7
TRIM40-206ENST00000376724 CT45A3Q8NHU0 189 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 LSM10Q969L4 123 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms