RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 TPPP2P59282 170 aa14.28□□□□□ -0.12
HDAC6-202ENST00000376610 UNC119Q13432 240 aa14.28□□□□□ -0.12
HDAC6-202ENST00000376610 ACSM6Q6P461 480 aa14.28□□□□□ -0.12
HDAC6-202ENST00000376610 SBSPONQ8IVN8 264 aa14.28□□□□□ -0.12
HDAC6-202ENST00000376610 OR5AN1Q8NGI8 311 aa14.28□□□□□ -0.12
HDAC6-202ENST00000376610 CLCC1Q96S66 551 aa14.28□□□□□ -0.12
HDAC6-202ENST00000376610 TSNAXQ99598 290 aaKnown RBP14.28□□□□□ -0.12
HDAC6-202ENST00000376610 ELOVL1Q9BW60 279 aa14.28□□□□□ -0.12
HDAC6-202ENST00000376610 TRBV6-6A0A0A6YYG2 114 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 TMEM14DPA8MWL7 114 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 FCN1O00602 326 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 SLC22A1O15245 554 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 TFAP2AP05549 437 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 HLA-DRB3P79483 266 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 RNLSQ5VYX0 342 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 LAIR2Q6ISS4 152 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 ZNF562Q6V9R5 426 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 OVCH2Q7RTZ1 564 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 FBLIM1Q8WUP2 373 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 MS4A10Q96PG2 267 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 FAM103A1Q9BTL3 118 aaKnown RBP14.27□□□□□ -0.13
HDAC6-202ENST00000376610 C11orf54Q9H0W9 315 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-202ENST00000376610 KCNK15Q9H427 330 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 PLGRKTQ9HBL7 147 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 FKBP14Q9NWM8 211 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 ZNF221Q9UK13 617 aa14.27□□□□□ -0.13
HDAC6-202ENST00000376610 SPDEFO95238 335 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 APOA2P02652 100 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 CDK1P06493 297 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 FRMD6-AS1P0C7T7 363 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 ARSBP15848 533 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 RPS16P62249 146 aaKnown RBP14.26□□□□□ -0.13
HDAC6-202ENST00000376610 PSG5Q15238 335 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 SPHARQ15513 63 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 MED22Q15528 200 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 LFNGQ8NES3 379 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 AGMATQ9BSE5 352 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 PARP12Q9H0J9 701 aaKnown RBP14.26□□□□□ -0.13
HDAC6-202ENST00000376610 C12orf4Q9NQ89 552 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 ZNF355PQ9NSJ1 428 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 AK3Q9UIJ7 227 aa14.26□□□□□ -0.13
HDAC6-202ENST00000376610 PTGES3LE9PB15 166 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 CA2P00918 260 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 TRGV3P03979 118 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 EGR2P11161 476 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-202ENST00000376610 RANBP1P43487 201 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 UFD1Q92890 307 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 PALMDQ9NP74 551 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 TPSG1Q9NRR2 321 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 SCN3BQ9NY72 215 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 OR1A1Q9P1Q5 309 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 STUB1Q9UNE7 303 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 GAB2Q9UQC2 676 aa14.25□□□□□ -0.13
HDAC6-202ENST00000376610 A0A0A6YYD4 124 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 C13orf42A0A1B0GVH6 325 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 SOCS1O15524 211 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 UCHL1P09936 223 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 QRFPP83859 136 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 P2RY14Q15391 338 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 SRSF7Q16629 238 aaKnown RBP eCLIP14.24□□□□□ -0.13
HDAC6-202ENST00000376610 CASC10Q5T4H9 136 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 OGFRL1Q5TC84 451 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-202ENST00000376610 ANKRD13BQ86YJ7 626 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 PDPNQ86YL7 162 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 DRAXINQ8NBI3 349 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-202ENST00000376610 GRPEL2Q8TAA5 225 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 PTX4Q96A99 478 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 HDHD3Q9BSH5 251 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-202ENST00000376610 RSRP1Q9BUV0 290 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 LPAR5Q9H1C0 372 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 HSF4Q9ULV5 492 aa14.24□□□□□ -0.13
HDAC6-202ENST00000376610 TRIM64CA6NLI5 447 aa14.23□□□□□ -0.13
HDAC6-202ENST00000376610 CNIH1O95406 144 aa14.23□□□□□ -0.13
HDAC6-202ENST00000376610 ZP3P21754 424 aa14.23□□□□□ -0.13
HDAC6-202ENST00000376610 MRPS15P82914 257 aaKnown RBP14.23□□□□□ -0.13
HDAC6-202ENST00000376610 FXYD3Q14802 87 aa14.23□□□□□ -0.13
HDAC6-202ENST00000376610 RAB11BQ15907 218 aa14.23□□□□□ -0.13
HDAC6-202ENST00000376610 LIPKQ5VXJ0 399 aa14.23□□□□□ -0.13
HDAC6-202ENST00000376610 POC5Q8NA72 575 aa14.23□□□□□ -0.13
HDAC6-202ENST00000376610 RHOVQ96L33 236 aa14.23□□□□□ -0.13
HDAC6-202ENST00000376610 CMSS1Q9BQ75 279 aaKnown RBP14.23□□□□□ -0.13
HDAC6-202ENST00000376610 RANGRFQ9HD47 186 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-202ENST00000376610 Q9N2K0 584 aa14.23□□□□□ -0.13
HDAC6-202ENST00000376610 DYNC2H1Q8NCM8 4307 aaKnown RBP14.23□□□□□ -0.13
HDAC6-202ENST00000376610 A0A0G2JLM5 398 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 H3BUA1 57 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 SLC17A2O00624 439 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 SLC25A17O43808 307 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 ARL6IP5O75915 188 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 IGKV1-16P04430 117 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 SCTP09683 121 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 CD37P11049 281 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 LYL1P12980 280 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 CBX3Q13185 183 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 TRAM1Q15629 374 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 SGPP2Q8IWX5 399 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 FAM89BQ8N5H3 189 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 OR56B1Q8NGI3 324 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 TMEM203Q969S6 136 aa14.22□□□□□ -0.13
HDAC6-202ENST00000376610 LSM2Q9Y333 95 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms