RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 ZANQ9Y493 2812 aa12.02□□□□□ -0.48
CHRDL2-202ENST00000376324 A0A0A6YYJ9 748 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 CRYM-AS1A6NIL9 109 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 MPPED1O15442 326 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 PROP1O75360 226 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 SLC22A5O76082 557 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 HLA-AP01891 365 aaKnown RBP12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 DIAPH2-AS1Q14236 149 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 HLA-DRB5Q30154 266 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 SP6Q3SY56 376 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 TMEM128Q5BJH2 165 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 NCR3LG1Q68D85 454 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 GLDNQ6ZMI3 551 aaPredicted RBP12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 SGPP2Q8IWX5 399 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 C8orf31Q8N9H6 132 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 ZNF596Q8TC21 504 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 NAA60Q9H7X0 242 aa12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 UNKLQ9H9P5 680 aaKnown RBP12.02□□□□□ -0.49
CHRDL2-202ENST00000376324 ZNF469Q96JG9 3925 aaPredicted RBP12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 PRAF2O60831 178 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 IGLV1-47P01700 117 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 IL5P05113 134 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 MECP2P51608 486 aaKnown RBP12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 UBE2MP61081 183 aaKnown RBP12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 RND3P61587 244 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 RPL30P62888 115 aaKnown RBP12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 DHRS2Q13268 280 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 OR2B11Q5JQS5 317 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 LYG2Q86SG7 212 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 UXS1Q8NBZ7 420 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 ZBTB34Q8NCN2 500 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 BEND2Q8NDZ0 799 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 OR11H6Q8NGC7 330 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 OR4P4Q8NGL7 312 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 FAM216AQ8WUB2 273 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 S1PR3Q99500 378 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 ALX4Q9H161 411 aaPredicted RBP12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 GPN1Q9HCN4 374 aaPredicted RBP12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 CSPG4Q6UVK1 2322 aa12.01□□□□□ -0.49
CHRDL2-202ENST00000376324 C9orf170A2RU37 121 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 BUB1B-PAK6H3BSN5 160 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 OR5AC1P0C628 307 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 GATA3P23771 443 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 IL3RAP26951 378 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 SUPT4H1P63272 117 aaKnown RBP12□□□□□ -0.49
CHRDL2-202ENST00000376324 DHODHQ02127 395 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 ZNF626Q68DY1 528 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 LIN54Q6MZP7 749 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 LHFPL4Q7Z7J7 247 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 TCTEX1D2Q8WW35 142 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 ZNF251Q9BRH9 671 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 AMMECR1Q9Y4X0 333 aaPredicted RBP12□□□□□ -0.49
CHRDL2-202ENST00000376324 TRAV40A0A0B4J280 105 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 C3orf85A0A1B0GTC6 90 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 LINC00473A8K010 186 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 SFT2D2O95562 160 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 AVPP01185 164 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 LGALS4P56470 323 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 ZNF436-AS1Q8NC38 126 aaPredicted RBP12□□□□□ -0.49
CHRDL2-202ENST00000376324 ZNF431Q8TF32 576 aaPredicted RBP12□□□□□ -0.49
CHRDL2-202ENST00000376324 RBMXL1Q96E39 390 aaKnown RBP12□□□□□ -0.49
CHRDL2-202ENST00000376324 TP53RKQ96S44 253 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 MRPL20Q9BYC9 149 aaKnown RBP12□□□□□ -0.49
CHRDL2-202ENST00000376324 OR51J1Q9H342 316 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 KCNIP3Q9Y2W7 256 aa12□□□□□ -0.49
CHRDL2-202ENST00000376324 ACANP16112 2415 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 ODF3BA8MYP8 253 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 SSNA1O43805 119 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 CREBL2O60519 120 aaPredicted RBP11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 IFNA2P01563 188 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 F2RP25116 425 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 PAX6P26367 422 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 HTR1DP28221 377 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 DUTP33316 252 aaKnown RBP11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 UBE2E1P51965 193 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 EIF4EBP1Q13541 118 aaPredicted RBP11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 MSMO1Q15800 293 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 LDLRAD2Q5SZI1 272 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 RUSC1-AS1Q66K80 236 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 C11orf88Q6PI97 169 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 ZNF833PQ6ZTB9 187 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 KCTD9Q7L273 389 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 RPEQ96AT9 228 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 HSD17B10Q99714 261 aaKnown RBP11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 GHITMQ9H3K2 345 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 GAB2Q9UQC2 676 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 HILPDAQ9Y5L2 63 aa11.99□□□□□ -0.49
CHRDL2-202ENST00000376324 RNF212BA8MTL3 300 aa11.98□□□□□ -0.49
CHRDL2-202ENST00000376324 A8MV72 311 aaPredicted RBP11.98□□□□□ -0.49
CHRDL2-202ENST00000376324 IGHV4-38-2P0DP08 117 aa11.98□□□□□ -0.49
CHRDL2-202ENST00000376324 CATR1Q13166 79 aa11.98□□□□□ -0.49
CHRDL2-202ENST00000376324 GPR157Q5UAW9 335 aa11.98□□□□□ -0.49
CHRDL2-202ENST00000376324 ZNF66Q6ZN08 573 aa11.98□□□□□ -0.49
CHRDL2-202ENST00000376324 TGIF2LXQ8IUE1 241 aa11.98□□□□□ -0.49
CHRDL2-202ENST00000376324 ST6GALNAC6Q969X2 333 aa11.98□□□□□ -0.49
CHRDL2-202ENST00000376324 DPM3Q9P2X0 92 aa11.98□□□□□ -0.49
CHRDL2-202ENST00000376324 TEX15Q9BXT5 2789 aa11.98□□□□□ -0.49
CHRDL2-202ENST00000376324 C7orf66A4D0T2 115 aa11.97□□□□□ -0.49
CHRDL2-202ENST00000376324 LEUTXA8MZ59 168 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms