RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 S100GP29377 79 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 ARF6P62330 175 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 PRB3Q04118 309 aaPredicted RBP8.54□□□□□ -1.04
PDPN-203ENST00000376061 SP6Q3SY56 376 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 LIN54Q6MZP7 749 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 BTNL3Q6UXE8 466 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 AKAP14Q86UN6 197 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 THNSL2Q86YJ6 484 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 ODF3L1Q8IXM7 274 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 C8orf31Q8N9H6 132 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 ZBTB34Q8NCN2 500 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 OR51H1Q8NH63 302 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 ZNF596Q8TC21 504 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 ANAPC16Q96DE5 110 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 PHB2Q99623 299 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 NEURL2Q9BR09 285 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 LPAR2Q9HBW0 351 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 WNK2Q9Y3S1 2297 aa8.54□□□□□ -1.04
PDPN-203ENST00000376061 IGHV2-26A0A0B4J1V2 119 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 A0A0B4J2A0 478 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 C3orf85A0A1B0GTC6 90 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 DBX1A6NMT0 343 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 J3QR06 171 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 PFDN1O60925 122 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 PROP1O75360 226 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 ANXA3P12429 323 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 COX7A1P24310 79 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 F2RP25116 425 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 RPL30P62888 115 aaKnown RBP8.53□□□□□ -1.04
PDPN-203ENST00000376061 CD300CQ08708 224 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 TMEM187Q14656 261 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 C2orf68Q2NKX9 166 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 RPL39P5Q59GN2 51 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 C11orf88Q6PI97 169 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 C1orf229Q6ZS94 237 aaPredicted RBP8.53□□□□□ -1.04
PDPN-203ENST00000376061 KCTD9Q7L273 389 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 LYG1Q8N1E2 194 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 ABHD12Q8N2K0 398 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 LINC00311Q8N616 119 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 UXS1Q8NBZ7 420 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.53□□□□□ -1.04
PDPN-203ENST00000376061 OR9G1Q8NH87 305 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 COQ8AQ8NI60 647 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 ZNF251Q9BRH9 671 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 CLEC7AQ9BXN2 247 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 SIRPDQ9H106 197 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 METTL8Q9H825 291 aaKnown RBP8.53□□□□□ -1.04
PDPN-203ENST00000376061 MMP26Q9NRE1 261 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 LIN7CQ9NUP9 197 aaKnown RBP8.53□□□□□ -1.04
PDPN-203ENST00000376061 MGAT4CQ9UBM8 478 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 SHPKQ9UHJ6 478 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 KPTNQ9Y664 436 aa8.53□□□□□ -1.04
PDPN-203ENST00000376061 PRRC2AP48634 2157 aaKnown RBP8.53□□□□□ -1.04
PDPN-203ENST00000376061 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.53□□□□□ -1.04
PDPN-203ENST00000376061 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 RNF212BA8MTL3 300 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 M0R1X1 148 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 GOSR2O14653 212 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 RAB29O14966 203 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 IGLV1-47P01700 117 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 PRTN3P24158 256 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 UCP1P25874 307 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 ZNF137PP52743 207 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 DVL1P1P54792 670 aaPredicted RBP8.52□□□□□ -1.05
PDPN-203ENST00000376061 CD83Q01151 205 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 KLRD1Q13241 179 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 HCP5Q6MZN7 132 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 PRSS57Q6UWY2 283 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 ZNF66Q6ZN08 573 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 C1orf122Q6ZSJ8 110 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 VMO1Q7Z5L0 202 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 LHFPL5Q8TAF8 219 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 GLYATL2Q8WU03 294 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 TNFRSF14Q92956 283 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 MSI2Q96DH6 328 aaKnown RBP8.52□□□□□ -1.05
PDPN-203ENST00000376061 C1orf159Q96HA4 380 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 HSD17B10Q99714 261 aaKnown RBP8.52□□□□□ -1.05
PDPN-203ENST00000376061 TMEM222Q9H0R3 208 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 SIRT7Q9NRC8 400 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 PIPOXQ9P0Z9 390 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 GAB2Q9UQC2 676 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 KCNIP3Q9Y2W7 256 aa8.52□□□□□ -1.05
PDPN-203ENST00000376061 LINC00473A8K010 186 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 CCSO14618 274 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 B3GALNT1O75752 331 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 CCNKO75909 580 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 MSMBP08118 114 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 MMP9P14780 707 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 DUTP33316 252 aaKnown RBP8.51□□□□□ -1.05
PDPN-203ENST00000376061 LINC00205P59089 165 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 SRPXP78539 464 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 LOXL1Q08397 574 aaPredicted RBP8.51□□□□□ -1.05
PDPN-203ENST00000376061 CATR1Q13166 79 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 ITPR3Q14573 2671 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 TM4SF20Q53R12 229 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 OR2B11Q5JQS5 317 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 DCAF12L2Q5VW00 463 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 ZNF833PQ6ZTB9 187 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 PNKDQ8N490 385 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 LRTM2Q8N967 370 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms