RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 OR5T1Q8NG75 326 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 DYNLRB2Q8TF09 96 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 THRSPQ92748 146 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 OR14A2Q96R54 314 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 PHB2Q99623 299 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 C9orf16Q9BUW7 83 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 FGF20Q9NP95 211 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-202ENST00000375271 COA4Q9NYJ1 87 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 GHRLQ9UBU3 117 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 ZNF221Q9UK13 617 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 TRBV5-5A0A0J9YX44 114 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 LOC100130705A0A1B0GUX0 176 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 CT45A6P0DMU7 189 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 CT45A5P0DMU8 189 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 CT45A7P0DMV0 189 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 EGR2P11161 476 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-202ENST00000375271 MAPK3P27361 379 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-202ENST00000375271 ETV1P50549 477 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 TAS2R43P59537 309 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 KLF5Q13887 457 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-202ENST00000375271 ZFP1Q6P2D0 407 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 ABHD14BQ96IU4 210 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 UQCC2Q9BRT2 126 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 MRPS18AQ9NVS2 196 aaKnown RBP10.78□□□□□ -0.68
PTCH1-202ENST00000375271 PEF1Q9UBV8 284 aaKnown RBP10.78□□□□□ -0.68
PTCH1-202ENST00000375271 TNCP24821 2201 aa10.78□□□□□ -0.68
PTCH1-202ENST00000375271 PNMA8CA0A1B0GUJ8 204 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 MPPED1O15442 326 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 OGG1O15527 345 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 UBBP0CG47 229 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 ZBTB25P24278 435 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 PDPNQ86YL7 162 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 C10orf67Q8IYJ2 551 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 ZFP41Q8N8Y5 198 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 OR5AN1Q8NGI8 311 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 OR2K2Q8NGT1 345 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 SNAPC3Q92966 411 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 TMEM68Q96MH6 324 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 SLC29A1Q99808 456 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 TMEM59Q9BXS4 323 aa10.77□□□□□ -0.69
PTCH1-202ENST00000375271 AIREO43918 545 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 OR2A4O95047 310 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 CEACAM6P40199 344 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 RNLSQ5VYX0 342 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 C5orf24Q7Z6I8 188 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 LAX1Q8IWV1 398 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 SVOPQ8N4V2 548 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 DRAXINQ8NBI3 349 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-202ENST00000375271 BVESQ8NE79 360 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 USMG5Q96IX5 58 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 SULT4A1Q9BR01 284 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 NEURL2Q9BR09 285 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 FAAP24Q9BTP7 215 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 HIPK2Q9H2X6 1198 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 PLEKHJ1Q9NW61 149 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 MGAT4AQ9UM21 535 aa10.76□□□□□ -0.69
PTCH1-202ENST00000375271 H3BNX3 289 aa10.75□□□□□ -0.69
PTCH1-202ENST00000375271 DYNC1I1O14576 645 aa10.75□□□□□ -0.69
PTCH1-202ENST00000375271 LY6G6CO95867 125 aa10.75□□□□□ -0.69
PTCH1-202ENST00000375271 GUCA2BQ16661 112 aa10.75□□□□□ -0.69
PTCH1-202ENST00000375271 SIGIRRQ6IA17 410 aa10.75□□□□□ -0.69
PTCH1-202ENST00000375271 C6orf201Q7Z4U5 140 aa10.75□□□□□ -0.69
PTCH1-202ENST00000375271 DDB2Q92466 427 aa10.75□□□□□ -0.69
PTCH1-202ENST00000375271 RIMS4Q9H426 269 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-202ENST00000375271 SIGLEC8Q9NYZ4 499 aa10.75□□□□□ -0.69
PTCH1-202ENST00000375271 DIMT1Q9UNQ2 313 aaKnown RBP10.75□□□□□ -0.69
PTCH1-202ENST00000375271 HYDINQ4G0P3 5121 aa10.75□□□□□ -0.69
PTCH1-202ENST00000375271 TRBV5-7A0A0A0MS05 114 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 CXorf65A6NEN9 183 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 ITGB1BP1O14713 200 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 MYL12BO14950 172 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 TUSC2O75896 110 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 SMN1Q16637 294 aaKnown RBP10.74□□□□□ -0.69
PTCH1-202ENST00000375271 TTC23Q5W5X9 447 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 GLT8D1Q68CQ7 371 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 TMEM80Q96HE8 168 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 HARBI1Q96MB7 349 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 DERL3Q96Q80 235 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 TINAGL1Q9GZM7 467 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-202ENST00000375271 SRD5A3Q9H8P0 318 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 SLC35D1Q9NTN3 355 aa10.74□□□□□ -0.69
PTCH1-202ENST00000375271 M0R1X1 148 aa10.73□□□□□ -0.69
PTCH1-202ENST00000375271 IGKV1-16P04430 117 aa10.73□□□□□ -0.69
PTCH1-202ENST00000375271 CSN3P07498 182 aa10.73□□□□□ -0.69
PTCH1-202ENST00000375271 HLA-DRB3P79483 266 aa10.73□□□□□ -0.69
PTCH1-202ENST00000375271 MRPS15P82914 257 aaKnown RBP10.73□□□□□ -0.69
PTCH1-202ENST00000375271 DEFA5Q01523 94 aa10.73□□□□□ -0.69
PTCH1-202ENST00000375271 ZNF343Q6P1L6 599 aa10.73□□□□□ -0.69
PTCH1-202ENST00000375271 SLC16A13Q7RTY0 426 aa10.73□□□□□ -0.69
PTCH1-202ENST00000375271 KCNG3Q8TAE7 436 aa10.73□□□□□ -0.69
PTCH1-202ENST00000375271 APH1BQ8WW43 257 aa10.73□□□□□ -0.69
PTCH1-202ENST00000375271 KCTD12Q96CX2 325 aaKnown RBP10.73□□□□□ -0.69
PTCH1-202ENST00000375271 C11orf54Q9H0W9 315 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-202ENST00000375271 IZUMO1RA6ND01 250 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 OR11H12B2RN74 326 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 SHOXO15266 292 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 ACTL6BO94805 426 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 LALBAP00709 142 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 CELP19835 753 aa10.72□□□□□ -0.69
PTCH1-202ENST00000375271 RPS11P62280 158 aaKnown RBP eCLIP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms