RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RIMS4Q9H426 269 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-203ENST00000374877 PIGBOS1A0A0B4J2F0 54 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 IFNL4K9M1U5 179 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 GFRA3O60609 400 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 P04436 131 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 G0S2P27469 103 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 GNB2P62879 340 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 PMP22Q01453 160 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 PAX5Q02548 391 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 DCAF10Q5QP82 559 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 RIPPLY2Q5TAB7 128 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 ACSM6Q6P461 480 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 OR2T10Q8NGZ9 312 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 LSM10Q969L4 123 aaKnown RBP9.38□□□□□ -0.91
CCDC40-203ENST00000374877 ACY3Q96HD9 319 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 AGMATQ9BSE5 352 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 DOCK11Q5JSL3 2073 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 DOCK7Q96N67 2140 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 TRAV24A0A0B4J272 114 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 SRD5A2P31213 254 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 CHRNA7P36544 502 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 ARF1P84077 181 aaKnown RBP9.38□□□□□ -0.91
CCDC40-203ENST00000374877 COA6Q5JTJ3 125 aaKnown RBP9.38□□□□□ -0.91
CCDC40-203ENST00000374877 SAXO1Q8IYX7 474 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 THOC3Q96J01 351 aaKnown RBP9.38□□□□□ -0.91
CCDC40-203ENST00000374877 WDFY4Q6ZS81 3184 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 DMDP11532 3685 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 DLL1O00548 723 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 SCGB1D1O95968 90 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 NGFP01138 241 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 GYPAP02724 150 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 CASP6P55212 293 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
CCDC40-203ENST00000374877 ACSF3Q4G176 576 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-203ENST00000374877 BEND2Q8NDZ0 799 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 KCNE4Q8WWG9 221 aa9.38□□□□□ -0.91
CCDC40-203ENST00000374877 AURKAIP1Q9NWT8 199 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-203ENST00000374877 PCSK5Q92824 1860 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 TMEM250H0YL14 139 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 MRPL33O75394 65 aaKnown RBP9.37□□□□□ -0.91
CCDC40-203ENST00000374877 DEFA4P12838 97 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 IGFBP7Q16270 282 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 FIP1L1Q6UN15 594 aaKnown RBP9.37□□□□□ -0.91
CCDC40-203ENST00000374877 COLCA1Q6ZS62 124 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 OR10G9Q8NGN4 311 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 OR10G7Q8NGN6 311 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 MRPL37Q9BZE1 423 aaKnown RBP9.37□□□□□ -0.91
CCDC40-203ENST00000374877 CBLN4Q9NTU7 201 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 PAGE4O60829 102 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 BMP5P22003 454 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 SOX8P57073 446 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 SRYQ05066 204 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 IQCJQ1A5X6 159 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 ACOT6Q3I5F7 207 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF585BQ52M93 769 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 LIN7CQ9NUP9 197 aaKnown RBP9.37□□□□□ -0.91
CCDC40-203ENST00000374877 ABI3Q9P2A4 366 aa9.37□□□□□ -0.91
CCDC40-203ENST00000374877 CEACAM6P40199 344 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 FAM58AQ8N1B3 248 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 NEU1Q99519 415 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 PRRG4Q9BZD6 226 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 PTPRBP23467 1997 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 CTXND1A0A1B0GTU2 59 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 IGLV2-14P01704 120 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 RAB4BP61018 213 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 FFAR4Q5NUL3 377 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 FAM78BQ5VT40 261 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 OR6C3Q9NZP0 311 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 TRAPPC2LQ9UL33 140 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 EP300Q09472 2414 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-203ENST00000374877 FRYLO94915 3013 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 DEGS1O15121 323 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 LILRA1O75019 489 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 GDF1P27539 372 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 FOXG1P55316 489 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-203ENST00000374877 FGFRL1Q8N441 504 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 ANAPC16Q96DE5 110 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 SNHG12Q9BXW3 62 aa9.36□□□□□ -0.91
CCDC40-203ENST00000374877 URB1O60287 2271 aaKnown RBP9.36□□□□□ -0.91
CCDC40-203ENST00000374877 LRP5LA4QPB2 252 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 C1QTNF9BB2RNN3 333 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 SIRPB1O00241 398 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 RHBDL1O75783 438 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 KRASP01116 189 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 EGR1P18146 543 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 PDLIM4P50479 330 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 CNN1P51911 297 aaKnown RBP9.35□□□□□ -0.91
CCDC40-203ENST00000374877 CYB5R2Q6BCY4 276 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 TEX38Q6PEX7 206 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 KCNIP4Q6PIL6 250 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 OR5A2Q8NGI9 324 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 APOBEC3DQ96AK3 386 aaPredicted RBP9.35□□□□□ -0.91
CCDC40-203ENST00000374877 CLN8Q9UBY8 286 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 FREM2Q5SZK8 3169 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 A0A1B0GUS0 222 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 SOX15O60248 233 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 NEIL1Q96FI4 390 aaPredicted RBP9.35□□□□□ -0.91
CCDC40-203ENST00000374877 FKBP11Q9NYL4 201 aa9.35□□□□□ -0.91
CCDC40-203ENST00000374877 CACNA1DQ01668 2161 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms