RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 Q8IYB0 196 aa14.3□□□□□ -0.12
RXRB-201ENST00000374680 IL22RA2Q969J5 263 aa14.3□□□□□ -0.12
RXRB-201ENST00000374680 SELLP14151 372 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 EDDM3BP56851 147 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 RAB2AP61019 212 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 SLC38A11Q08AI6 406 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 UTF1Q5T230 341 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 INO80CQ6PI98 192 aaPredicted RBP14.29□□□□□ -0.12
RXRB-201ENST00000374680 ZNRF1Q8ND25 227 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 DEFB108BQ8NET1 73 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 OR5T1Q8NG75 326 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 SLC25A22Q9H936 323 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 RELNP78509 3460 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 TGIF2-C20orf24A0A0A6YYL0 155 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 LINC00473A8K010 186 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 SOX15O60248 233 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 COL8A2P25067 703 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 MDH2P40926 338 aaKnown RBP14.29□□□□□ -0.12
RXRB-201ENST00000374680 MEOX2P50222 304 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 MSMPQ1L6U9 139 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 PDZD11Q5EBL8 140 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 FIP1L1Q6UN15 594 aaKnown RBP14.29□□□□□ -0.12
RXRB-201ENST00000374680 ACP7Q6ZNF0 438 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 ZNF561Q8N587 486 aa14.29□□□□□ -0.12
RXRB-201ENST00000374680 MBNL3Q9NUK0 354 aaKnown RBP14.29□□□□□ -0.12
RXRB-201ENST00000374680 ODAMA1E959 279 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 C4orf17Q53FE4 359 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 GATAD1Q8WUU5 269 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 RCC1LQ96I51 464 aaKnown RBP14.28□□□□□ -0.12
RXRB-201ENST00000374680 NIPSNAP3BQ9BS92 247 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.28□□□□□ -0.12
RXRB-201ENST00000374680 SPRY3O43610 288 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 YIF1AO95070 293 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 CXCL1P09341 107 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 EGR1P18146 543 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 BRWD1-AS2P59051 145 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 M0R1B8 84 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 RD3LP0DJH9 198 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 GNG12Q9UBI6 72 aa14.28□□□□□ -0.12
RXRB-201ENST00000374680 YLPM1P49750 1951 aaKnown RBP14.27□□□□□ -0.12
RXRB-201ENST00000374680 IGKV1D-33P01593 117 aa14.27□□□□□ -0.12
RXRB-201ENST00000374680 IGKV1-33P01594 117 aa14.27□□□□□ -0.12
RXRB-201ENST00000374680 MMP9P14780 707 aa14.27□□□□□ -0.12
RXRB-201ENST00000374680 TNFRSF9Q07011 255 aa14.27□□□□□ -0.12
RXRB-201ENST00000374680 ZNF718Q3SXZ3 478 aa14.27□□□□□ -0.12
RXRB-201ENST00000374680 MOB1BQ7L9L4 216 aa14.27□□□□□ -0.12
RXRB-201ENST00000374680 CD177Q8N6Q3 437 aa14.27□□□□□ -0.12
RXRB-201ENST00000374680 WIPI2Q9Y4P8 454 aa14.27□□□□□ -0.12
RXRB-201ENST00000374680 TACC2O95359 2948 aa14.27□□□□□ -0.13
RXRB-201ENST00000374680 TNCP24821 2201 aa14.27□□□□□ -0.13
RXRB-201ENST00000374680 IGHV1-18A0A0C4DH31 117 aa14.27□□□□□ -0.13
RXRB-201ENST00000374680 ERVFRD-1P60508 538 aa14.27□□□□□ -0.13
RXRB-201ENST00000374680 HBG1P69891 147 aa14.27□□□□□ -0.13
RXRB-201ENST00000374680 HBG2P69892 147 aa14.27□□□□□ -0.13
RXRB-201ENST00000374680 CTAG1AP78358 180 aa14.27□□□□□ -0.13
RXRB-201ENST00000374680 LSM10Q969L4 123 aaKnown RBP14.27□□□□□ -0.13
RXRB-201ENST00000374680 CXXC4Q9H2H0 198 aa14.27□□□□□ -0.13
RXRB-201ENST00000374680 SLC39A9Q9NUM3 307 aa14.27□□□□□ -0.13
RXRB-201ENST00000374680 CD200P41217 278 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 NDUFA6P56556 154 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 RHEBQ15382 184 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 ZNF645Q8N7E2 425 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 Q8WTZ3 238 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 LHX4Q969G2 390 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 TRAV17A0A0B4J275 112 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 IGHV2OR16-5A0A0B4J2B6 119 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 FCGR3BO75015 233 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 TFF3Q07654 80 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 NCR3LG1Q68D85 454 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 H2BFWTQ7Z2G1 175 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 NECAP1Q8NC96 275 aa14.26□□□□□ -0.13
RXRB-201ENST00000374680 SMCO3A2RU48 225 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 CYB5BO43169 146 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 IGKV3-15P01624 115 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 RPUSD4Q96CM3 377 aaKnown RBP14.25□□□□□ -0.13
RXRB-201ENST00000374680 SH3BGRL2Q9UJC5 107 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 MUC6Q6W4X9 2439 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 MAP1LC3B2A6NCE7 125 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 OOEPA6NGQ2 149 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 C5orf52A6NGY3 159 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 IFNA17P01571 189 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 AGAP20933 346 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 PRDX2P32119 198 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 KIAA0141Q14154 515 aaPredicted RBP14.25□□□□□ -0.13
RXRB-201ENST00000374680 RPL39P5Q59GN2 51 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 RPP25LQ8N5L8 163 aaKnown RBP14.25□□□□□ -0.13
RXRB-201ENST00000374680 TAF15Q92804 592 aaKnown RBP eCLIP14.25□□□□□ -0.13
RXRB-201ENST00000374680 SARAFQ96BY9 339 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 TVP23CQ96ET8 276 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 SSX3Q99909 188 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 MAP1LC3BQ9GZQ8 125 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 WDR61Q9GZS3 305 aaKnown RBP14.25□□□□□ -0.13
RXRB-201ENST00000374680 EGLN1Q9GZT9 426 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 IFT22Q9H7X7 185 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 ASCL3Q9NQ33 180 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 AURKAIP1Q9NWT8 199 aaPredicted RBP14.25□□□□□ -0.13
RXRB-201ENST00000374680 PROCRQ9UNN8 238 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 LRRC75BQ2VPJ9 315 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 ZNF506Q5JVG8 444 aa14.25□□□□□ -0.13
RXRB-201ENST00000374680 MOGAT3Q86VF5 341 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms