RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 FAM106CPP0CH98 169 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 CT45A6P0DMU7 189 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 CT45A5P0DMU8 189 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 CT45A7P0DMV0 189 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 AADACP22760 399 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 TAS2R19P59542 299 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 MSMO1Q15800 293 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 ZNF79Q15937 498 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 RPL39P5Q59GN2 51 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 RNASE12Q5GAN4 147 aaKnown RBP9.12□□□□□ -0.95
HSPG2-202ENST00000374676 MOB3BQ86TA1 216 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 NABP2Q9BQ15 211 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 THAP7Q9BT49 309 aaPredicted RBP9.12□□□□□ -0.95
HSPG2-202ENST00000374676 OR2D2Q9H210 308 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 RAB18Q9NP72 206 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 PTTG2Q9NZH5 202 aa9.12□□□□□ -0.95
HSPG2-202ENST00000374676 RBM7Q9Y580 266 aaKnown RBP9.12□□□□□ -0.95
HSPG2-202ENST00000374676 IGKV1D-13A0A0B4J2D9 117 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 GPR137BO60478 399 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 PPYP01298 95 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 CD3DP04234 171 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 SNRNP70P08621 437 aaKnown RBP9.11□□□□□ -0.95
HSPG2-202ENST00000374676 IGKV1-13P0DP09 117 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 SRSF2Q01130 221 aaKnown RBP9.11□□□□□ -0.95
HSPG2-202ENST00000374676 ZNF45Q02386 682 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 LSAMPQ13449 338 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 LY6EQ16553 131 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 KRTAP21-3Q3LHN1 58 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 PYDC2Q56P42 97 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 CCBE1Q6UXH8 406 aaPredicted RBP9.11□□□□□ -0.95
HSPG2-202ENST00000374676 C16orf82Q7Z2V1 217 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 Q8N402 240 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 ZNF645Q8N7E2 425 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 OR6F1Q8NGZ6 308 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 OR56B4Q8NH76 319 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 CAPSLQ8WWF8 208 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 ZNF2Q9BSG1 426 aaPredicted RBP9.11□□□□□ -0.95
HSPG2-202ENST00000374676 MRPL20Q9BYC9 149 aaKnown RBP9.11□□□□□ -0.95
HSPG2-202ENST00000374676 SRRQ9GZT4 340 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 TNFRSF19Q9NS68 423 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 SDHAF2Q9NX18 166 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 TENM1Q9UKZ4 2725 aa9.11□□□□□ -0.95
HSPG2-202ENST00000374676 ANKRD20A5PA0PJZ0 165 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 FAM181BA6NEQ2 426 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 OR5H14A6NHG9 310 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 J3QRK9 145 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 OR2F2O95006 317 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 IGLV2-14P01704 120 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 CD24P25063 80 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 MC5RP33032 325 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 TSPAN5P62079 268 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 TAGLNQ01995 201 aaKnown RBP9.1□□□□□ -0.95
HSPG2-202ENST00000374676 MEF2DQ14814 521 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 RNASE10Q5GAN6 216 aaKnown RBP9.1□□□□□ -0.95
HSPG2-202ENST00000374676 STEAP1BQ6NZ63 245 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 TMEM17Q86X19 198 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 ARRDC1Q8N5I2 433 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 Q8N6K4 173 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 GDPD1Q8N9F7 314 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 ZBTB34Q8NCN2 500 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 OR5AN1Q8NGI8 311 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 OR2T10Q8NGZ9 312 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 MOB3AQ96BX8 217 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 C5orf30Q96GV9 206 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 ADTRPQ96IZ2 230 aa9.1□□□□□ -0.95
HSPG2-202ENST00000374676 EAF1Q96JC9 268 aaPredicted RBP9.1□□□□□ -0.95
HSPG2-202ENST00000374676 RBM14Q96PK6 669 aaKnown RBP9.1□□□□□ -0.95
HSPG2-202ENST00000374676 TINAGL1Q9GZM7 467 aaPredicted RBP9.1□□□□□ -0.95
HSPG2-202ENST00000374676 IGHV3-72A0A0B4J1Y9 119 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 M0QYG6 137 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 M0R1X1 148 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 RAB3DO95716 219 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 MOSP00540 346 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 IGKV1D-33P01593 117 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 IGKV1-33P01594 117 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 IFNA6P05013 189 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 AKAIN1P0CW23 69 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 DUTP33316 252 aaKnown RBP9.09□□□□□ -0.95
HSPG2-202ENST00000374676 THBS3P49746 956 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 UCP3P55916 312 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 HERV-K104P61576 105 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 LHFPL1Q86WI0 220 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 MFSD4AQ8N468 514 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 SECTM1Q8WVN6 248 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 DEDD2Q8WXF8 326 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 TMEM158Q8WZ71 300 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 BORCS5Q969J3 196 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 TRIM63Q969Q1 353 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 AKR1E2Q96JD6 320 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 SLC5A7Q9GZV3 580 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 AKIP1Q9NQ31 210 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 CCL28Q9NRJ3 127 aa9.09□□□□□ -0.95
HSPG2-202ENST00000374676 PLXNB1O43157 2135 aa9.08□□□□□ -0.96
HSPG2-202ENST00000374676 H0YJW9 148 aa9.08□□□□□ -0.96
HSPG2-202ENST00000374676 M0QZK8 103 aa9.08□□□□□ -0.96
HSPG2-202ENST00000374676 CHST1O43916 411 aa9.08□□□□□ -0.96
HSPG2-202ENST00000374676 CRYBA1P05813 215 aa9.08□□□□□ -0.96
HSPG2-202ENST00000374676 ZNF735P0CB33 412 aa9.08□□□□□ -0.96
HSPG2-202ENST00000374676 HKR1P10072 659 aa9.08□□□□□ -0.96
HSPG2-202ENST00000374676 TMEM11P17152 192 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms